Variant report

Variant	rs2822975
Chromosome Location	chr21:16266353-16266354
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1002460	0.89[EUR][1000 genomes]
rs1980425	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2403841	0.89[CEU][hapmap]
rs2822971	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2822972	0.88[EUR][1000 genomes]
rs2822973	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2822974	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2822981	0.85[CEU][hapmap]
rs7279246	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7279396	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs8134307	0.90[EUR][1000 genomes]
rs8134602	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9653708	0.84[EUR][1000 genomes]
rs9982221	0.84[EUR][1000 genomes]
rs9983796	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16261400-16267000	Weak transcription	Fetal Muscle Leg	muscle
2	chr21:16262000-16284200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr21:16266000-16272400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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