Variant report

Variant rs2758847
Chromosome Location chr6:86349103-86349104
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:86316400-86349200 Strong transcription HUES6 Cell Line embryonic stem cell
2 chr6:86316400-86350600 Strong transcription Fetal Thymus thymus
3 chr6:86317600-86349800 Strong transcription Rectal Mucosa Donor 31 rectum
4 chr6:86319000-86350000 Strong transcription Fetal Muscle Trunk muscle
5 chr6:86319600-86350000 Strong transcription Rectal Mucosa Donor 29 rectum
6 chr6:86320200-86350400 Strong transcription H1 Cell Line embryonic stem cell
7 chr6:86321000-86349600 Strong transcription Fetal Adrenal Gland Adrenal Gland
8 chr6:86323600-86351200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:86326400-86349200 Strong transcription Primary hematopoietic stem cells blood
10 chr6:86328000-86349800 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr6:86332400-86349200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr6:86335200-86349600 Strong transcription Fetal Muscle Leg muscle
13 chr6:86335600-86349200 Strong transcription Fetal Kidney kidney
14 chr6:86339000-86349200 Strong transcription NH-A brain
15 chr6:86339200-86349200 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr6:86340000-86349400 Strong transcription Primary B cells from cord blood blood
17 chr6:86340400-86350400 Weak transcription Aorta Aorta
18 chr6:86341200-86349400 Strong transcription Brain Inferior Temporal Lobe brain
19 chr6:86345600-86349200 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr6:86346000-86349400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr6:86346200-86349800 Genic enhancers Primary T helper naive cells from peripheral blood blood
22 chr6:86346200-86350400 Weak transcription Fetal Intestine Small intestine
23 chr6:86346400-86350600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr6:86346600-86350000 Genic enhancers HepG2 liver
25 chr6:86346600-86352400 Transcr. at gene 5' and 3' Dnd41 blood
26 chr6:86347000-86349800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
27 chr6:86347000-86349800 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr6:86347000-86350200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr6:86347000-86350200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
30 chr6:86347000-86350200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:86347000-86350400 Genic enhancers Primary T helper cells fromperipheralblood blood
32 chr6:86347000-86350400 Genic enhancers Colon Smooth Muscle Colon
33 chr6:86347000-86351200 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
34 chr6:86347400-86349200 Weak transcription Brain Angular Gyrus brain
35 chr6:86347400-86349600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
36 chr6:86347400-86349600 Genic enhancers Rectal Smooth Muscle rectum
37 chr6:86347400-86350800 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr6:86347600-86349800 Genic enhancers Muscle Satellite Cultured Cells --
39 chr6:86347800-86349400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr6:86347800-86350200 Genic enhancers Duodenum Mucosa Duodenum
41 chr6:86347800-86350400 Genic enhancers Skeletal Muscle Female skeletal muscle
42 chr6:86348200-86349200 Genic enhancers NHEK skin
43 chr6:86348200-86349400 Genic enhancers iPS-18 Cell Line embryonic stem cell
44 chr6:86348200-86349600 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr6:86348200-86349800 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr6:86348200-86350000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:86348200-86350200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr6:86348200-86350400 Genic enhancers Duodenum Smooth Muscle Duodenum
49 chr6:86348200-86350600 Genic enhancers Fetal Lung lung
50 chr6:86348200-86351600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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