Variant report

Variant	rs2761092
Chromosome Location	chr9:15106115-15106116
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10116796	0.87[AFR][1000 genomes]
rs10120028	0.87[AFR][1000 genomes]
rs10121250	0.87[AFR][1000 genomes]
rs10122944	0.87[AFR][1000 genomes]
rs10756646	0.82[AFR][1000 genomes]
rs10810345	0.87[AFR][1000 genomes]
rs10810346	0.87[AFR][1000 genomes]
rs1746330	0.90[AFR][1000 genomes]
rs1780152	0.81[AFR][1000 genomes]
rs1780161	0.90[AFR][1000 genomes]
rs1936713	0.87[AFR][1000 genomes]
rs1936714	0.87[AFR][1000 genomes]
rs1936720	0.87[AFR][1000 genomes]
rs1936721	0.87[AFR][1000 genomes]
rs2105414	0.87[AFR][1000 genomes]
rs2105415	0.87[AFR][1000 genomes]
rs2186027	0.81[AFR][1000 genomes]
rs2382516	0.87[AFR][1000 genomes]
rs2761103	0.94[AFR][1000 genomes]
rs2761110	0.87[AFR][1000 genomes]
rs2761111	0.87[AFR][1000 genomes]
rs2761114	0.87[AFR][1000 genomes]
rs2761117	0.91[AFR][1000 genomes]
rs2800569	0.87[AFR][1000 genomes]
rs2800597	1.00[AFR][1000 genomes]
rs2800614	0.90[AFR][1000 genomes]
rs2800616	0.90[AFR][1000 genomes]
rs2800619	0.90[AFR][1000 genomes]
rs2800620	0.90[AFR][1000 genomes]
rs4237137	0.87[AFR][1000 genomes]
rs4275306	0.87[AFR][1000 genomes]
rs4305996	0.91[AFR][1000 genomes]
rs4307425	0.87[AFR][1000 genomes]
rs4373617	0.87[AFR][1000 genomes]
rs4401969	0.87[AFR][1000 genomes]
rs4451417	0.87[AFR][1000 genomes]
rs4517211	0.87[AFR][1000 genomes]
rs4520265	0.82[AFR][1000 genomes]
rs4526461	0.87[AFR][1000 genomes]
rs4559332	0.91[AFR][1000 genomes]
rs4579616	0.87[AFR][1000 genomes]
rs4740601	0.87[AFR][1000 genomes]
rs4741456	0.82[AFR][1000 genomes]
rs4741457	0.87[AFR][1000 genomes]
rs4741458	0.87[AFR][1000 genomes]
rs4741459	0.87[AFR][1000 genomes]
rs4741461	0.87[AFR][1000 genomes]
rs6474891	0.87[AFR][1000 genomes]
rs6474892	0.87[AFR][1000 genomes]
rs6474894	0.87[AFR][1000 genomes]
rs7019779	0.87[AFR][1000 genomes]
rs7019934	0.84[AFR][1000 genomes]
rs7466658	0.87[AFR][1000 genomes]
rs7466688	0.87[AFR][1000 genomes]
rs7469171	0.87[AFR][1000 genomes]
rs7469190	0.87[AFR][1000 genomes]
rs9298721	0.87[AFR][1000 genomes]
rs9298722	0.87[AFR][1000 genomes]
rs9298723	0.87[AFR][1000 genomes]
rs9298724	0.87[AFR][1000 genomes]
rs9987459	0.87[AFR][1000 genomes]
rs9987584	0.87[AFR][1000 genomes]
rs9987587	0.87[AFR][1000 genomes]
rs9987732	0.87[AFR][1000 genomes]
rs9987917	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831519	chr9:15018160-15209127	Weak transcription Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1019567	chr9:15031398-15159409	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv892623	chr9:15079847-15127129	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15101800-15110400	Weak transcription	Fetal Stomach	stomach
2	chr9:15105200-15114600	Weak transcription	Thymus	Thymus
3	chr9:15106000-15106200	Enhancers	Fetal Thymus	thymus

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