Variant report

Variant	rs276316
Chromosome Location	chr2:114749830-114749831
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10176461	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs156667	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs156713	0.85[ASN][1000 genomes]
rs156731	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2046543	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs275417	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs276318	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs276819	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs276821	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3982224	0.81[ASN][1000 genomes]
rs6741208	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7606387	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114734000-114751800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr2:114736200-114761000	Weak transcription	HSMMtube	muscle
3	chr2:114737600-114751400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr2:114737800-114754400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr2:114739600-114752600	Weak transcription	NH-A	brain
6	chr2:114741200-114761000	Weak transcription	HSMM	muscle
7	chr2:114743000-114751000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr2:114746200-114752800	Weak transcription	HepG2	liver
9	chr2:114749400-114750000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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