Variant report

Variant	rs2785080
Chromosome Location	chr10:89788889-89788890
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11202639	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs11202641	0.89[EUR][1000 genomes]
rs12254375	0.90[CHB][hapmap]
rs12266639	1.00[CHB][hapmap]
rs12267986	0.90[CHB][hapmap]
rs2673812	0.95[EUR][1000 genomes]
rs2673823	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2735353	0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs4258291	0.90[CHB][hapmap]
rs56146807	0.91[EUR][1000 genomes]
rs66924863	0.89[EUR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89783200-89792200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr10:89784800-89789000	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr10:89786000-89789000	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr10:89787000-89789200	Enhancers	Primary T cells from cord blood	blood
5	chr10:89787000-89789200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr10:89787000-89789400	Enhancers	Dnd41	blood
7	chr10:89787200-89789000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr10:89787400-89789000	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr10:89787400-89789000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
10	chr10:89787400-89789000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr10:89787400-89789000	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr10:89787400-89789000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr10:89787400-89789000	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr10:89787400-89789000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
15	chr10:89787400-89789000	Enhancers	Pancreatic Islets	Pancreatic Islet
16	chr10:89787400-89789000	Enhancers	Rectal Mucosa Donor 31	rectum
17	chr10:89787400-89789200	Enhancers	Liver	Liver
18	chr10:89787400-89789400	Enhancers	Fetal Intestine Large	intestine
19	chr10:89787600-89790600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr10:89787600-89792000	Weak transcription	Osteobl	bone
21	chr10:89787600-89792200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr10:89787800-89789400	Enhancers	Fetal Intestine Small	intestine
23	chr10:89788000-89789000	Enhancers	Stomach Mucosa	stomach
24	chr10:89788000-89789200	Enhancers	Duodenum Mucosa	Duodenum
25	chr10:89788000-89789200	Enhancers	HepG2	liver
26	chr10:89788000-89789200	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr10:89788000-89791800	Weak transcription	NHDF-Ad	bronchial
28	chr10:89788200-89790400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr10:89788800-89789000	Enhancers	HUES6 Cell Line	embryonic stem cell
30	chr10:89788800-89789400	Enhancers	NHEK	skin
31	chr10:89788800-89790200	Weak transcription	GM12878-XiMat	blood
32	chr10:89788800-89790400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr10:89788800-89790600	Weak transcription	Primary hematopoietic stem cells	blood
34	chr10:89788800-89796800	Weak transcription	Primary T helper cells fromperipheralblood	blood
35	chr10:89788800-89797200	Weak transcription	Fetal Thymus	thymus
36	chr10:89788800-89801400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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