Variant report

Variant	rs2791636
Chromosome Location	chr2:125650506-125650507
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12619535	1.00[LWK][hapmap]
rs1840202	0.86[JPT][hapmap]
rs1840205	1.00[CHD][hapmap];0.86[JPT][hapmap]
rs1840206	0.88[ASN][1000 genomes]
rs1840207	1.00[CHD][hapmap];0.93[JPT][hapmap];0.88[ASN][1000 genomes]
rs1966870	1.00[CHD][hapmap];0.93[JPT][hapmap]
rs2226028	1.00[CHD][hapmap];0.86[JPT][hapmap]
rs2602647	1.00[CHD][hapmap];0.93[JPT][hapmap]
rs2602652	0.84[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap]
rs2685170	0.93[JPT][hapmap]
rs2791631	0.86[JPT][hapmap]
rs922863	1.00[LWK][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv834361	chr2:125601081-125810992	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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