Variant report

Variant	rs2792440
Chromosome Location	chr7:151008925-151008926
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1012007	0.89[ASN][1000 genomes]
rs1012008	0.90[ASN][1000 genomes]
rs12535753	0.94[ASN][1000 genomes]
rs12539643	0.90[ASN][1000 genomes]
rs401168	0.83[ASN][1000 genomes]
rs438906	0.83[ASN][1000 genomes]
rs4725401	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6964641	0.85[ASN][1000 genomes]
rs73171826	0.82[ASN][1000 genomes]
rs760234	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs887018	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs909210	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3368227	chr7:151008519-151012117	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151002600-151010600	Weak transcription	Right Atrium	heart
2	chr7:151006600-151010600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr7:151006800-151010000	Weak transcription	Fetal Lung	lung
4	chr7:151006800-151010800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr7:151006800-151010800	Weak transcription	NHDF-Ad	bronchial
6	chr7:151007000-151010600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr7:151008400-151009800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr7:151008800-151009000	Weak transcription	Spleen	Spleen
9	chr7:151008800-151011000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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