Variant report

Variant	rs909210
Chromosome Location	chr7:151004621-151004622
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1012007	0.86[ASN][1000 genomes]
rs1012008	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12535753	0.97[ASN][1000 genomes]
rs12538729	0.81[AMR][1000 genomes]
rs12539643	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs17173769	1.00[AFR][1000 genomes]
rs2792440	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs401168	0.87[CHB][hapmap];0.80[ASN][1000 genomes]
rs438906	0.80[ASN][1000 genomes]
rs4725401	1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6964641	0.84[ASN][1000 genomes]
rs760234	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs887018	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151001000-151005400	Weak transcription	Spleen	Spleen
2	chr7:151001000-151008200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:151001200-151006000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr7:151002200-151008400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr7:151002400-151005000	Weak transcription	Fetal Lung	lung
6	chr7:151002600-151010600	Weak transcription	Right Atrium	heart
7	chr7:151004600-151004800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links