Variant report

Variant rs2817200
Chromosome Location chr6:24584366-24584367
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24535200-24591200 Weak transcription Fetal Brain Male brain
2 chr6:24581800-24586000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:24583200-24584600 Enhancers Colon Smooth Muscle Colon
4 chr6:24583200-24585000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:24583200-24585400 Enhancers Fetal Heart heart
6 chr6:24583200-24586800 Enhancers Fetal Intestine Small intestine
7 chr6:24583400-24584400 Enhancers iPS-20b Cell Line embryonic stem cell
8 chr6:24583400-24584400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:24583400-24584400 Enhancers Brain Angular Gyrus brain
10 chr6:24583400-24584400 Enhancers Brain Cingulate Gyrus brain
11 chr6:24583400-24584400 Enhancers Brain Germinal Matrix brain
12 chr6:24583400-24584400 Enhancers Brain Hippocampus Middle brain
13 chr6:24583400-24584400 Enhancers Brain Substantia Nigra brain
14 chr6:24583400-24584400 Enhancers Rectal Mucosa Donor 29 rectum
15 chr6:24583400-24584400 Enhancers Rectal Mucosa Donor 31 rectum
16 chr6:24583400-24584400 Bivalent Enhancer HepG2 liver
17 chr6:24583400-24584600 Enhancers HSMM muscle
18 chr6:24583400-24584600 Enhancers Osteobl bone
19 chr6:24583600-24584400 Enhancers HUES6 Cell Line embryonic stem cell
20 chr6:24583600-24584400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:24583600-24584400 Enhancers Muscle Satellite Cultured Cells --
22 chr6:24583600-24584400 Enhancers Liver Liver
23 chr6:24583600-24584400 Enhancers Fetal Kidney kidney
24 chr6:24583600-24584800 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr6:24583600-24587200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr6:24583800-24584400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr6:24583800-24584400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:24583800-24584400 Enhancers NHDF-Ad bronchial
29 chr6:24583800-24585000 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr6:24583800-24585800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr6:24583800-24601200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr6:24583800-24606600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr6:24584000-24584400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:24584000-24584400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:24584000-24584400 Flanking Active TSS Brain Anterior Caudate brain
36 chr6:24584000-24584400 Enhancers Skeletal Muscle Female skeletal muscle
37 chr6:24584000-24584600 Enhancers Cortex derived primary cultured neurospheres brain
38 chr6:24584000-24584600 Enhancers Fetal Brain Female brain
39 chr6:24584000-24584600 Active TSS Pancreatic Islets Pancreatic Islet
40 chr6:24584000-24585200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr6:24584000-24585600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr6:24584000-24587200 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr6:24584200-24584400 Enhancers H1 Cell Line embryonic stem cell
44 chr6:24584200-24584400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr6:24584200-24584400 Flanking Active TSS Fetal Lung lung
46 chr6:24584200-24584600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr6:24584200-24584600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr6:24584200-24584600 Enhancers Duodenum Mucosa Duodenum
49 chr6:24584200-24584600 Enhancers Rectal Smooth Muscle rectum
50 chr6:24584200-24584600 Enhancers HSMMtube muscle

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