Variant report

Variant	rs2822895
Chromosome Location	chr21:16123230-16123231
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1380446	0.88[EUR][1000 genomes]
rs1882870	0.80[EUR][1000 genomes]
rs1903202	0.88[EUR][1000 genomes]
rs2822891	0.86[CHD][hapmap]
rs2822892	0.84[CHD][hapmap]
rs2822898	0.88[EUR][1000 genomes]
rs62218103	0.83[AFR][1000 genomes]
rs8132820	0.87[TSI][hapmap];0.88[EUR][1000 genomes]
rs9636593	0.83[AFR][1000 genomes]
rs9636594	0.84[CHD][hapmap];0.80[MEX][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs2822895	ANXA1	trans	lymphoblastoid	seeQTL
rs2822895	HSPA13	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16118600-16124000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr21:16122600-16125600	Active TSS	K562	blood
3	chr21:16123200-16123600	Flanking Active TSS	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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