Variant report

Variant	rs8132820
Chromosome Location	chr21:16123544-16123545
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1380446	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1882870	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1882871	0.84[CHD][hapmap]
rs1882872	0.84[CHD][hapmap]
rs1903202	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2822889	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs2822890	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs2822895	0.87[TSI][hapmap];0.88[EUR][1000 genomes]
rs2822898	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2822900	0.84[CHD][hapmap]
rs7275823	0.84[CHD][hapmap]
rs8128481	0.86[JPT][hapmap]
rs8130955	0.84[CHD][hapmap]
rs8134576	0.84[CHD][hapmap]
rs954826	0.84[CHD][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16118600-16124000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr21:16122600-16125600	Active TSS	K562	blood
3	chr21:16123200-16123600	Flanking Active TSS	Dnd41	blood
4	chr21:16123400-16123600	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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