Variant report

Variant	rs2823094
Chromosome Location	chr21:16520878-16520879
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10482866	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2254223	0.93[ASN][1000 genomes]
rs2823099	0.88[EUR][1000 genomes]
rs9974747	1.00[CEU][hapmap];0.95[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9974832	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9977479	0.82[CEU][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes]
rs9979508	1.00[CEU][hapmap];0.88[CHD][hapmap];0.90[TSI][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9983032	0.86[ASN][1000 genomes]
rs9984213	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16513000-16521600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr21:16514600-16529600	Weak transcription	Primary hematopoietic stem cells	blood
3	chr21:16516800-16521800	Weak transcription	Liver	Liver
4	chr21:16517200-16526800	Weak transcription	Pancreas	Pancrea
5	chr21:16520000-16521000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr21:16520800-16521400	Enhancers	Adipose Nuclei	Adipose
7	chr21:16520800-16522000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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