Variant report

Variant	rs2836981
Chromosome Location	chr21:40688365-40688366
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:7)
CpG islands
(count:0)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:7 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr21:40688361-40688448	HepG2	liver:	n/a	n/a
2	POLR2A	chr21:40687403-40688602	K562	blood:	n/a	n/a
3	MYC	chr21:40688180-40688380	MCF10A-Er-Src	breast:	n/a	n/a
4	STAT3	chr21:40688277-40688378	MCF10A-Er-Src	breast:	n/a	n/a
5	GATA3	chr21:40687560-40688516	MCF-7	breast:	n/a	n/a
6	FOS	chr21:40688051-40688472	MCF10A-Er-Src	breast:	n/a	n/a
7	FOS	chr21:40688066-40688465	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	21:40687235-40690033..21:40757151-40764378	K562	blood:
2	chr21:40683319..40690926-chr21:40755872..40762716,23	MCF-7	breast:
3	chr21:40681596..40696529-chr21:40715399..40724266,46	K562	blood:
4	chr1:9064907..9065782-chr21:40687864..40688368,2	MCF-7	breast:
5	chr19:2475923..2476512-chr21:40687961..40688912,2	Hela-S3	cervix:
6	chr21:40555201..40557033-chr21:40687768..40689494,2	K562	blood:
7	chr21:40581217..40582784-chr21:40687990..40689879,2	K562	blood:
8	chr21:40683271..40692626-chr21:40743960..40754349,22	MCF-7	breast:
9	chr21:40684466..40689800-chr21:40758261..40763098,10	K562	blood:
10	chr21:40687654..40692063-chr21:40815994..40821163,6	MCF-7	breast:
11	chr21:40682856..40693378-chr21:40754350..40765471,56	MCF-7	breast:
12	chr21:40683489..40689074-chr21:40750757..40754639,9	MCF-7	breast:
13	chr21:40684332..40690368-chr21:40756970..40764337,16	K562	blood:

No data

Variant related genes	Relation type
BRWD1-IT2	TF binding region
BRWD1	TF binding region
ENSG00000182093	Chromatin interaction
ENSG00000238556	Chromatin interaction
ENSG00000227406	Chromatin interaction
ENSG00000099860	Chromatin interaction
ENSG00000185437	Chromatin interaction
ENSG00000157578	Chromatin interaction
ENSG00000183527	Chromatin interaction
ENSG00000252915	Chromatin interaction
ENSG00000205581	Chromatin interaction
ENSG00000272991	Chromatin interaction

Extended variants
information (count: 151 )
Associated
traits (count: 22 )

rSNPs within LD-proxies of this variant (count:144)

rs_ID	r²[population]
rs1011413	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10154217	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1041439	0.84[CHB][hapmap]
rs11088471	1.00[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11088472	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11910705	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11910906	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11910971	0.84[CHB][hapmap]
rs11911822	0.96[CEU][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12151994	0.85[AFR][1000 genomes]
rs12482181	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs12626405	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13051430	0.84[CHB][hapmap]
rs13625	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs14194	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs1541100	0.84[CHB][hapmap]
rs1541102	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs1882779	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1888487	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1888488	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.94[MEX][hapmap];0.88[MKK][hapmap];0.95[TSI][hapmap];0.92[YRI][hapmap];0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1963676	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1984022	0.85[YRI][hapmap]
rs1984748	0.84[CHB][hapmap]
rs2005933	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2026265	0.85[YRI][hapmap]
rs2026266	0.84[CHB][hapmap]
rs2026267	0.83[MEX][hapmap]
rs2037925	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2142111	0.92[CEU][hapmap];0.87[JPT][hapmap];0.85[YRI][hapmap];0.80[AMR][1000 genomes]
rs2142117	0.84[CHB][hapmap]
rs2150410	0.84[CHB][hapmap]
rs2150413	0.92[ASW][hapmap];0.89[YRI][hapmap]
rs2150414	0.92[ASW][hapmap];0.89[YRI][hapmap]
rs2150415	0.92[ASW][hapmap];0.82[YRI][hapmap]
rs2183573	0.92[CEU][hapmap];0.93[GIH][hapmap];0.81[JPT][hapmap];0.90[TSI][hapmap];0.86[AMR][1000 genomes]
rs2183575	0.83[CHB][hapmap]
rs2183576	0.83[CHB][hapmap]
rs2234543	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2245455	1.00[ASW][hapmap];0.92[CEU][hapmap];0.90[GIH][hapmap];0.82[JPT][hapmap];0.90[LWK][hapmap];0.82[MEX][hapmap];0.86[TSI][hapmap];0.81[YRI][hapmap];0.80[AMR][1000 genomes]
rs2272576	0.95[CHB][hapmap];0.81[ASN][1000 genomes]
rs2272577	0.95[CHB][hapmap];0.83[ASN][1000 genomes]
rs2272578	0.83[ASN][1000 genomes]
rs2297258	0.83[ASN][1000 genomes]
rs2410104	0.84[CHB][hapmap]
rs2410123	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2410124	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2735306	0.88[MEX][hapmap]
rs2776307	0.83[MEX][hapmap]
rs2836925	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836929	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836932	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836933	0.85[YRI][hapmap]
rs2836956	0.92[ASW][hapmap];0.89[YRI][hapmap]
rs2836957	0.85[YRI][hapmap]
rs2836958	0.92[ASW][hapmap];0.89[YRI][hapmap]
rs2836964	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836965	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836967	0.85[YRI][hapmap]
rs2836968	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836969	0.92[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2836971	0.88[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2836974	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836975	0.96[CEU][hapmap];0.84[CHB][hapmap];0.89[CHD][hapmap];0.93[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2836982	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2836985	0.92[ASW][hapmap]
rs2836986	1.00[CEU][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2836987	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.98[TSI][hapmap];0.88[YRI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2836988	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34240248	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34436313	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35182074	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35909862	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs371625	0.85[AMR][1000 genomes]
rs3746885	0.83[ASN][1000 genomes]
rs3746886	0.83[ASN][1000 genomes]
rs377098	0.92[CEU][hapmap];0.87[JPT][hapmap];0.85[AMR][1000 genomes]
rs414850	0.80[AMR][1000 genomes]
rs418298	0.92[CEU][hapmap];0.91[GIH][hapmap];0.87[JPT][hapmap];0.84[MEX][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes]
rs418359	0.92[CEU][hapmap];0.91[GIH][hapmap];0.87[JPT][hapmap];0.84[MEX][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes]
rs419469	0.85[ASW][hapmap];0.92[CEU][hapmap];0.91[GIH][hapmap];0.87[JPT][hapmap];0.84[MEX][hapmap];0.93[TSI][hapmap];0.84[AMR][1000 genomes]
rs428602	0.92[CEU][hapmap];0.87[JPT][hapmap];0.89[YRI][hapmap];0.82[AMR][1000 genomes]
rs429955	0.83[AMR][1000 genomes]
rs442972	0.85[AMR][1000 genomes]
rs452377	0.85[AMR][1000 genomes]
rs4624474	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.98[TSI][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4816619	0.84[CHB][hapmap]
rs4816620	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4816623	0.87[ASN][1000 genomes]
rs4817999	0.80[AMR][1000 genomes]
rs4818005	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4818007	0.84[CHB][hapmap]
rs4818011	0.84[CHB][hapmap]
rs4818015	0.96[CEU][hapmap];0.89[CHB][hapmap];0.89[CHD][hapmap];0.93[GIH][hapmap];0.91[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4818017	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61300849	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6517519	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs6517523	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs6517526	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs6517529	0.84[CHB][hapmap]
rs6517531	0.83[CHB][hapmap]
rs6517532	0.84[CHB][hapmap]
rs6517535	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6517538	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs6517540	0.84[ASN][1000 genomes]
rs6517541	0.95[CHB][hapmap];0.84[ASN][1000 genomes]
rs718225	0.84[CHB][hapmap]
rs719230	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7275773	0.84[CHB][hapmap]
rs7276774	0.91[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7278297	0.89[YRI][hapmap]
rs7278985	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7279558	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7280326	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7280375	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs7281853	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7282604	0.92[CEU][hapmap];0.91[GIH][hapmap];0.87[JPT][hapmap];0.84[MEX][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes]
rs7283439	0.84[CHB][hapmap]
rs7283516	0.92[YRI][hapmap];0.85[AFR][1000 genomes]
rs8127087	0.85[YRI][hapmap]
rs8127391	0.84[CHB][hapmap]
rs8127986	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8128026	0.86[YRI][hapmap]
rs8128102	0.81[YRI][hapmap]
rs8128118	0.86[CHB][hapmap]
rs8130795	0.83[AMR][1000 genomes]
rs8130854	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8130984	0.88[YRI][hapmap]
rs8131150	0.84[CHB][hapmap]
rs8131263	0.84[CHB][hapmap]
rs8132230	0.84[CHB][hapmap]
rs8132285	0.85[YRI][hapmap]
rs9636957	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs973521	0.84[CHB][hapmap]
rs997147	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9974757	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9975119	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9975562	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9975614	0.82[ASN][1000 genomes]
rs9978591	0.84[CHB][hapmap]
rs9978775	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9979483	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9981301	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9981656	0.87[ASN][1000 genomes]
rs9982111	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv459259	chr21:40571246-40701169	Weak transcription Flanking Active TSS Strong transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv587480	chr21:40571246-40701169	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	esv3429298	chr21:40670131-40688774	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
4	nsv913744	chr21:40670167-40757973	Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
5	nsv1059420	chr21:40684295-40745952	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
6	nsv587482	chr21:40684427-40706594	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
7	nsv587483	chr21:40686327-40718161	Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:22)

SNP	Gene	Cis/trans	Tissue	Source
rs2836981	PSMG1	cis	lung	GTEx
rs2836981	PSMG1	cis	Skin Sun Exposed Lower leg	GTEx
rs2836981	PSMG1	cis	parietal	SCAN
rs2836981	BRWD1	cis	multi-tissue	Pritchard
rs2836981	C21orf107	cis	multi-tissue	Pritchard
rs2836981	BRWD1	cis	Temporal Cortex	GTEx
rs2836981	LOC643790	trans	multi-tissue	Pritchard
rs2836981	BRWD1	cis	cerebellum	SCAN
rs2836981	PSMG1	cis	lymphoblastoid	seeQTL
rs2836981	DSCR2	cis	lesional skin	skin_eQTL
rs2836981	BRWD1	cis	Cerebellum	GTEx
rs2836981	DSCR2	cis	multi-tissue	Pritchard
rs2836981	BRWD1	cis	Frontal Cortex	GTEx
rs2836981	HMGN1	cis	multi-tissue	Pritchard
rs2836981	BRWD1	Cis_1M	lymphoblastoid	RTeQTL
rs2836981	BRWD1	cis	Brain Pons	GTEx
rs2836981	PSMG1	cis	Esophagus Mucosa	GTEx
rs2836981	BRWD1	cis	lymphoblastoid	seeQTL
rs2836981	PSMG1	cis	Artery Tibial	GTEx
rs2836981	BRWD1	cis	parietal	SCAN
rs2836981	DSCR2	cis	normal skin	skin_eQTL
rs2836981	BRWD1	cis	Lymphoblastoid	GTEx

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40686600-40691400	Enhancers	Primary B cells from peripheral blood	blood
2	chr21:40686800-40688800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
3	chr21:40686800-40689200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr21:40686800-40689200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr21:40686800-40689200	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr21:40686800-40689400	Weak transcription	Gastric	stomach
7	chr21:40686800-40689400	Weak transcription	Left Ventricle	heart
8	chr21:40686800-40689600	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr21:40686800-40689800	Enhancers	NHEK	skin
10	chr21:40686800-40690600	Weak transcription	Psoas Muscle	Psoas
11	chr21:40686800-40691200	Weak transcription	Right Ventricle	heart
12	chr21:40686800-40691800	Weak transcription	Right Atrium	heart
13	chr21:40686800-40692200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr21:40687000-40688400	Enhancers	Primary T helper cells PMA-I stimulated	--
15	chr21:40687000-40688600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr21:40687000-40688800	Enhancers	HSMM	muscle
17	chr21:40687000-40689000	Weak transcription	Liver	Liver
18	chr21:40687000-40689000	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr21:40687000-40689000	Weak transcription	Stomach Mucosa	stomach
20	chr21:40687000-40689000	Weak transcription	HepG2	liver
21	chr21:40687000-40689200	Weak transcription	Duodenum Mucosa	Duodenum
22	chr21:40687000-40689200	Enhancers	K562	blood
23	chr21:40687000-40689600	Weak transcription	Primary B cells from cord blood	blood
24	chr21:40687000-40689600	Weak transcription	Fetal Lung	lung
25	chr21:40687000-40689800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr21:40687000-40689800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr21:40687000-40689800	Enhancers	HMEC	breast
28	chr21:40687000-40690400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr21:40687000-40690600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr21:40687000-40690600	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr21:40687000-40690800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr21:40687000-40691000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr21:40687000-40691000	Weak transcription	Muscle Satellite Cultured Cells	--
34	chr21:40687000-40691000	Weak transcription	Adipose Nuclei	Adipose
35	chr21:40687000-40691000	Weak transcription	Colon Smooth Muscle	Colon
36	chr21:40687000-40691000	Weak transcription	Hela-S3	cervix
37	chr21:40687000-40691000	Weak transcription	NHLF	lung
38	chr21:40687000-40691200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
39	chr21:40687000-40691200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr21:40687000-40691200	Weak transcription	Pancreas	Pancrea
41	chr21:40687000-40691200	Weak transcription	NHDF-Ad	bronchial
42	chr21:40687000-40691200	Weak transcription	Osteobl	bone
43	chr21:40687000-40691800	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr21:40687000-40691800	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr21:40687000-40692000	Weak transcription	Rectal Smooth Muscle	rectum
46	chr21:40687000-40693400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr21:40687200-40688600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr21:40687200-40688600	Weak transcription	Placenta	Placenta
49	chr21:40687200-40689000	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr21:40687200-40689000	Weak transcription	Fetal Intestine Large	intestine

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