Variant report

Variant rs28372952
Chromosome Location chr2:172779122-172779123
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172778200-172779400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
2 chr2:172778200-172779800 Active TSS Brain Anterior Caudate brain
3 chr2:172778200-172779800 Active TSS Duodenum Smooth Muscle Duodenum
4 chr2:172778200-172780000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr2:172778200-172780000 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr2:172778400-172779400 Active TSS Rectal Mucosa Donor 29 rectum
7 chr2:172778400-172779600 Active TSS Fetal Brain Female brain
8 chr2:172778400-172779600 Active TSS Thymus Thymus
9 chr2:172778400-172779800 Active TSS ES-WA7 Cell Line embryonic stem cell
10 chr2:172778400-172779800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:172778400-172779800 Active TSS Brain Cingulate Gyrus brain
12 chr2:172778400-172779800 Active TSS Brain Inferior Temporal Lobe brain
13 chr2:172778400-172779800 Active TSS Fetal Muscle Trunk muscle
14 chr2:172778400-172779800 Active TSS Left Ventricle heart
15 chr2:172778400-172779800 Active TSS Stomach Smooth Muscle stomach
16 chr2:172778400-172779800 Active TSS GM12878-XiMat blood
17 chr2:172778400-172780000 Active TSS H1 Cell Line embryonic stem cell
18 chr2:172778400-172780000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:172778400-172780000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:172778400-172780000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:172778400-172780000 Active TSS HUES48 Cell Line embryonic stem cell
22 chr2:172778400-172780000 Active TSS HUES6 Cell Line embryonic stem cell
23 chr2:172778400-172780000 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr2:172778400-172780000 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr2:172778400-172780000 Active TSS Brain Angular Gyrus brain
26 chr2:172778400-172780000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
27 chr2:172778400-172780000 Active TSS Colonic Mucosa Colon
28 chr2:172778400-172780000 Active TSS Pancreatic Islets Pancreatic Islet
29 chr2:172778400-172780000 Active TSS Fetal Lung lung
30 chr2:172778400-172780000 Active TSS Psoas Muscle Psoas
31 chr2:172778400-172780000 Active TSS Right Ventricle heart
32 chr2:172778400-172780000 Active TSS HMEC breast
33 chr2:172778400-172780000 Active TSS HSMMtube muscle
34 chr2:172778400-172780000 Active TSS NHDF-Ad bronchial
35 chr2:172778400-172780000 Active TSS NHLF lung
36 chr2:172778400-172780200 Active TSS H9 Cell Line embryonic stem cell
37 chr2:172778400-172780200 Active TSS Ovary ovary
38 chr2:172778400-172780200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr2:172778400-172780400 Active TSS ES-I3 Cell Line embryonic stem cell
40 chr2:172778400-172780400 Active TSS HUES64 Cell Line embryonic stem cell
41 chr2:172778400-172780400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
42 chr2:172778400-172780400 Active TSS Right Atrium heart
43 chr2:172778400-172780800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
44 chr2:172778600-172779200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:172778600-172779600 Active TSS Fetal Brain Male brain
46 chr2:172778600-172779600 Active TSS Fetal Heart heart
47 chr2:172778600-172779600 Active TSS Spleen Spleen
48 chr2:172778600-172779600 Bivalent/Poised TSS HepG2 liver
49 chr2:172778600-172779800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr2:172778600-172779800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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