Variant report

Variant	rs6711813
Chromosome Location	chr2:172731810-172731811
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:172730405..172732690-chr2:172749588..172752325,2	K562	blood:

Variant related genes	Relation type
ENSG00000115840	Chromatin interaction

Extended variants
information (count: 111 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs10166352	0.83[AMR][1000 genomes]
rs10177679	0.83[GIH][hapmap];1.00[JPT][hapmap]
rs10185633	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10188587	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10191399	0.87[AFR][1000 genomes]
rs10196521	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs1022358	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.82[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs10439296	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10930496	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10930498	0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs10930500	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1105264	0.87[AFR][1000 genomes]
rs11676484	0.88[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs11677573	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs11678892	0.89[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs11692418	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11695887	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11887208	0.89[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs12468218	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12473516	0.81[CHD][hapmap];0.83[GIH][hapmap];0.82[JPT][hapmap]
rs12478215	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12479374	1.00[JPT][hapmap]
rs12617265	1.00[ASW][hapmap];0.89[CHB][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12619137	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12692976	0.85[LWK][hapmap]
rs12692977	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12692979	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13017988	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13018515	0.85[AMR][1000 genomes]
rs13021571	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13399316	1.00[ASW][hapmap];0.83[GIH][hapmap];0.88[JPT][hapmap]
rs1400816	1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs1443700	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1543168	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1607253	1.00[JPT][hapmap];0.92[YRI][hapmap]
rs16859721	0.83[ASW][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs17580984	1.00[JPT][hapmap]
rs17614989	1.00[JPT][hapmap]
rs17615013	1.00[JPT][hapmap]
rs1878583	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs1982288	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs1996425	0.87[AFR][1000 genomes]
rs2028670	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs2028671	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs2028672	1.00[JPT][hapmap]
rs2037164	0.85[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2056202	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2138873	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2176466	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2292813	0.88[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs2292814	0.89[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2357064	0.89[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs2357206	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2357208	1.00[JPT][hapmap]
rs28372952	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs2884123	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs312917	0.89[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs3770443	1.00[JPT][hapmap]
rs3770444	0.86[AFR][1000 genomes]
rs3770453	0.84[ASW][hapmap];0.89[CEU][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.97[MKK][hapmap];0.88[TSI][hapmap];0.89[YRI][hapmap];0.84[EUR][1000 genomes]
rs3770457	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs3821092	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs3821094	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs3821095	0.83[YRI][hapmap]
rs3821096	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs4072279	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4324292	0.89[CHB][hapmap];0.88[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4668413	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4668415	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4668416	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4668417	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs4668419	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59414074	0.86[ASN][1000 genomes]
rs59853867	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6433313	0.94[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6433315	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6433317	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6433318	1.00[ASW][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs6433322	0.83[ASW][hapmap];0.81[CHD][hapmap];0.88[JPT][hapmap]
rs6707142	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap]
rs6708365	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6709299	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6714214	1.00[ASW][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs6726991	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6727459	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6736159	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6740705	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6753859	0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs6757680	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[GIH][hapmap];0.88[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6758494	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6760680	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7340516	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.94[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7371503	0.88[ASW][hapmap];1.00[CEU][hapmap];0.89[CHB][hapmap];0.81[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7579509	0.89[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7580132	1.00[ASW][hapmap];0.89[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7580232	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7583860	0.84[AFR][1000 genomes]
rs7588025	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7594478	1.00[ASW][hapmap];1.00[CEU][hapmap];0.88[CHB][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7604933	0.83[AFR][1000 genomes]
rs925881	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9287948	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs949548	0.94[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9636293	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs970948	0.94[ASW][hapmap];0.89[CEU][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.82[TSI][hapmap];0.89[YRI][hapmap];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834457	chr2:172564939-172770901	Strong transcription Genic enhancers Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv583611	chr2:172683481-172750257	Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
3	nsv1006214	chr2:172691689-172754296	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
4	nsv536036	chr2:172691689-172754296	Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
5	nsv875410	chr2:172693780-172896587	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
6	nsv875411	chr2:172693780-172942448	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs6711813	AC068039.4	cis	Stomach	GTEx
rs6711813	RAPGEF4	cis	cerebellum	SCAN

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172690200-172750200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:172691400-172738600	Weak transcription	Esophagus	oesophagus
3	chr2:172692200-172733400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr2:172693400-172734800	Weak transcription	Brain Hippocampus Middle	brain
5	chr2:172693600-172734400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr2:172693600-172734600	Weak transcription	HSMM	muscle
7	chr2:172693800-172732600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr2:172693800-172734600	Weak transcription	Right Ventricle	heart
9	chr2:172694000-172732800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr2:172694000-172734600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr2:172694000-172734600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr2:172698600-172734600	Weak transcription	Adipose Nuclei	Adipose
13	chr2:172699000-172734600	Weak transcription	Brain Angular Gyrus	brain
14	chr2:172705400-172735200	Weak transcription	Stomach Smooth Muscle	stomach
15	chr2:172709400-172734400	Weak transcription	Colon Smooth Muscle	Colon
16	chr2:172709600-172749600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr2:172709600-172749600	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr2:172710800-172747800	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr2:172711600-172740000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
20	chr2:172712200-172749200	Weak transcription	Hela-S3	cervix
21	chr2:172712400-172738200	Weak transcription	Primary hematopoietic stem cells	blood
22	chr2:172715400-172732600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr2:172715400-172735200	Weak transcription	NHLF	lung
24	chr2:172716600-172736600	Weak transcription	Ovary	ovary
25	chr2:172721200-172734600	Weak transcription	Right Atrium	heart
26	chr2:172721200-172734600	Weak transcription	HSMMtube	muscle
27	chr2:172721200-172749600	Weak transcription	Thymus	Thymus
28	chr2:172721400-172732400	Weak transcription	HMEC	breast
29	chr2:172721400-172732600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr2:172721400-172734600	Weak transcription	Aorta	Aorta
31	chr2:172721400-172734600	Weak transcription	Brain Anterior Caudate	brain
32	chr2:172721400-172734600	Weak transcription	Psoas Muscle	Psoas
33	chr2:172721600-172733200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
34	chr2:172721800-172732800	Weak transcription	Fetal Heart	heart
35	chr2:172723200-172733800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr2:172724000-172749600	Weak transcription	Small Intestine	intestine
37	chr2:172724600-172733600	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr2:172724800-172749600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr2:172725200-172734600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr2:172725200-172735000	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr2:172725400-172732800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr2:172725400-172749800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr2:172725800-172732400	Weak transcription	Osteobl	bone
44	chr2:172725800-172732600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr2:172725800-172734400	Weak transcription	K562	blood
46	chr2:172725800-172749600	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr2:172727800-172738600	Weak transcription	Dnd41	blood
48	chr2:172728000-172733800	Weak transcription	Skeletal Muscle Female	skeletal muscle
49	chr2:172728200-172734600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr2:172730400-172732000	Strong transcription	Left Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links