Variant report

Variant rs7340516
Chromosome Location chr2:172785714-172785715
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172779800-172787200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:172779800-172828400 Weak transcription Aorta Aorta
3 chr2:172780000-172789000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:172780000-172791000 Weak transcription Esophagus oesophagus
5 chr2:172780000-172812800 Weak transcription Lung lung
6 chr2:172780000-172829000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:172780200-172786200 Weak transcription Ovary ovary
8 chr2:172780200-172786800 Weak transcription H1 Cell Line embryonic stem cell
9 chr2:172780200-172786800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:172780200-172787600 Weak transcription Pancreas Pancrea
11 chr2:172780200-172789800 Weak transcription Colonic Mucosa Colon
12 chr2:172780200-172792800 Weak transcription Spleen Spleen
13 chr2:172780200-172795000 Weak transcription Psoas Muscle Psoas
14 chr2:172780200-172795400 Weak transcription Gastric stomach
15 chr2:172780200-172822200 Weak transcription H9 Cell Line embryonic stem cell
16 chr2:172780200-172840400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:172780400-172787000 Weak transcription Brain Hippocampus Middle brain
18 chr2:172780400-172787200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:172780400-172796600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr2:172780400-172820600 Weak transcription Brain Angular Gyrus brain
21 chr2:172780400-172848800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:172780600-172786800 Weak transcription Thymus Thymus
23 chr2:172780600-172787200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:172780600-172788400 Weak transcription NH-A brain
25 chr2:172780600-172795200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:172780600-172811200 Weak transcription HSMMtube muscle
27 chr2:172780600-172811200 Weak transcription NHEK skin
28 chr2:172780600-172820600 Weak transcription Brain Anterior Caudate brain
29 chr2:172780600-172822200 Weak transcription Liver Liver
30 chr2:172780600-172822200 Weak transcription Fetal Kidney kidney
31 chr2:172780600-172847400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr2:172780600-172854200 Weak transcription Small Intestine intestine
33 chr2:172781000-172787600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:172781000-172789800 Weak transcription NHLF lung
35 chr2:172781000-172792600 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr2:172781000-172795400 Weak transcription Stomach Smooth Muscle stomach
37 chr2:172781000-172811000 Weak transcription Right Ventricle heart
38 chr2:172781000-172811200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr2:172781200-172786800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:172781200-172788000 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr2:172781200-172801400 Weak transcription NHDF-Ad bronchial
42 chr2:172781200-172808800 Weak transcription Placenta Amnion Placenta Amnion
43 chr2:172781200-172811200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr2:172781400-172786200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr2:172781400-172788200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:172781400-172788200 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:172781400-172792400 Weak transcription Fetal Heart heart
48 chr2:172781400-172822000 Weak transcription HUVEC blood vessel
49 chr2:172781800-172786400 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr2:172781800-172788400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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