Variant report

Variant rs28374506
Chromosome Location chr9:711396-711397
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:708800-712000 Weak transcription Primary B cells from peripheral blood blood
2 chr9:709200-711600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr9:709200-711600 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr9:709200-715600 Weak transcription Primary monocytes fromperipheralblood blood
5 chr9:709200-715800 Weak transcription Fetal Brain Female brain
6 chr9:709400-712000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:709400-712400 Weak transcription Right Atrium heart
8 chr9:709400-713200 Weak transcription Fetal Brain Male brain
9 chr9:709600-711400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr9:709600-711800 Weak transcription Fetal Heart heart
11 chr9:709600-727800 Weak transcription Stomach Mucosa stomach
12 chr9:710000-711800 Strong transcription Osteobl bone
13 chr9:710000-713000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr9:710200-711600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr9:710200-712600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr9:710400-711400 Genic enhancers Breast Myoepithelial Primary Cells Breast
17 chr9:710400-712600 Genic enhancers Liver Liver
18 chr9:710400-715000 Strong transcription Fetal Intestine Small intestine
19 chr9:710400-715600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr9:710600-711800 Strong transcription Colon Smooth Muscle Colon
21 chr9:710600-712000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:710600-712800 Strong transcription Duodenum Smooth Muscle Duodenum
23 chr9:710600-713400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr9:710600-713400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr9:710600-713400 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr9:710600-713400 Strong transcription HMEC breast
27 chr9:710600-713600 Strong transcription A549 lung
28 chr9:710600-714000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr9:710600-714200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr9:710600-715400 Strong transcription NHEK skin
31 chr9:710800-711400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr9:710800-711400 Strong transcription Right Ventricle heart
33 chr9:710800-711600 Genic enhancers Primary hematopoietic stem cells short term culture blood
34 chr9:710800-711600 Strong transcription Adipose Nuclei Adipose
35 chr9:710800-711800 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr9:710800-711800 Strong transcription Stomach Smooth Muscle stomach
37 chr9:710800-712200 Genic enhancers Brain Hippocampus Middle brain
38 chr9:710800-712200 Genic enhancers Brain Substantia Nigra brain
39 chr9:710800-712200 Strong transcription Left Ventricle heart
40 chr9:710800-712400 Strong transcription Lung lung
41 chr9:710800-712600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr9:710800-712800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr9:710800-712800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
44 chr9:710800-712800 Strong transcription Fetal Muscle Trunk muscle
45 chr9:710800-712800 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr9:710800-713000 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr9:710800-713000 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr9:710800-713000 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr9:710800-713000 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr9:710800-713000 Strong transcription Thymus Thymus

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