Variant report

Variant rs28418605
Chromosome Location chr14:55037383-55037384
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55031000-55037400 Active TSS Aorta Aorta
2 chr14:55031000-55037400 Active TSS Duodenum Smooth Muscle Duodenum
3 chr14:55034800-55050400 Weak transcription Gastric stomach
4 chr14:55035000-55037400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr14:55035000-55037400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
6 chr14:55035200-55039000 Weak transcription Small Intestine intestine
7 chr14:55035200-55047200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr14:55035400-55038000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr14:55035600-55037400 Flanking Active TSS Osteobl bone
10 chr14:55035600-55038000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr14:55035800-55037400 Flanking Active TSS HSMMtube muscle
12 chr14:55035800-55037600 Enhancers Psoas Muscle Psoas
13 chr14:55035800-55038000 Enhancers A549 lung
14 chr14:55036000-55037600 Enhancers Cortex derived primary cultured neurospheres brain
15 chr14:55036000-55038200 Transcr. at gene 5' and 3' NHEK skin
16 chr14:55036000-55038600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr14:55036200-55037400 Flanking Active TSS NHDF-Ad bronchial
18 chr14:55036200-55038200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
19 chr14:55036200-55073000 Weak transcription Pancreas Pancrea
20 chr14:55036400-55037400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr14:55036400-55037400 Enhancers Liver Liver
22 chr14:55036400-55037400 Enhancers Rectal Mucosa Donor 29 rectum
23 chr14:55036400-55037400 Active TSS Right Atrium heart
24 chr14:55036400-55038000 Weak transcription Brain Cingulate Gyrus brain
25 chr14:55036400-55038200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
26 chr14:55036400-55039000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr14:55036400-55039600 Weak transcription Fetal Intestine Large intestine
28 chr14:55036400-55040400 Weak transcription Lung lung
29 chr14:55036400-55043400 Weak transcription Placenta Placenta
30 chr14:55036400-55043600 Weak transcription Fetal Brain Female brain
31 chr14:55036400-55049000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr14:55036400-55058200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr14:55036600-55037400 Enhancers HUES6 Cell Line embryonic stem cell
34 chr14:55036600-55037400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr14:55036600-55037400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr14:55036600-55037400 Enhancers Fetal Stomach stomach
37 chr14:55036600-55038000 Flanking Active TSS HUVEC blood vessel
38 chr14:55036600-55038200 Enhancers Primary T helper cells PMA-I stimulated --
39 chr14:55036600-55038200 Genic enhancers Fetal Muscle Leg muscle
40 chr14:55036600-55038200 Enhancers Hela-S3 cervix
41 chr14:55036600-55038800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr14:55036600-55043400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr14:55036600-55047400 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr14:55036800-55037400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
45 chr14:55036800-55037400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr14:55036800-55037400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
47 chr14:55036800-55037400 Flanking Active TSS Colon Smooth Muscle Colon
48 chr14:55036800-55037400 Flanking Active TSS Rectal Smooth Muscle rectum
49 chr14:55036800-55037400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
50 chr14:55036800-55037400 Flanking Active TSS HepG2 liver

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