The 2.0 version of rSNPBase

Variant report

Variant rs57571275
Chromosome Location chr14:55080602-55080603
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55057000-55091000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr14:55067600-55080800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr14:55070400-55116200 Weak transcription HMEC breast
4 chr14:55073400-55091000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr14:55073800-55092000 Weak transcription Spleen Spleen
6 chr14:55074000-55081600 Weak transcription Psoas Muscle Psoas
7 chr14:55074000-55081600 Weak transcription Right Ventricle heart
8 chr14:55074000-55081600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr14:55074000-55081800 Weak transcription Lung lung
10 chr14:55074000-55084800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr14:55074000-55089400 Weak transcription Right Atrium heart
12 chr14:55074000-55089600 Weak transcription Fetal Muscle Trunk muscle
13 chr14:55074000-55089600 Weak transcription Stomach Smooth Muscle stomach
14 chr14:55074000-55091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr14:55074200-55088600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr14:55076200-55084800 Weak transcription Fetal Muscle Leg muscle
17 chr14:55076400-55082800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr14:55076600-55087600 Weak transcription HUVEC blood vessel
19 chr14:55077400-55080800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
20 chr14:55077600-55084000 Weak transcription NHEK skin
21 chr14:55077600-55092000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr14:55077800-55082000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr14:55077800-55089200 Weak transcription Colon Smooth Muscle Colon
24 chr14:55078200-55088400 Weak transcription Adipose Nuclei Adipose
25 chr14:55078200-55091200 Weak transcription Rectal Smooth Muscle rectum
26 chr14:55078400-55081000 Weak transcription Muscle Satellite Cultured Cells --
27 chr14:55078400-55081200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr14:55078400-55081600 Weak transcription HSMM muscle
29 chr14:55078400-55083800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr14:55078400-55083800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr14:55078400-55088200 Weak transcription Placenta Amnion Placenta Amnion
32 chr14:55078400-55091200 Weak transcription Fetal Stomach stomach
33 chr14:55078800-55081800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr14:55078800-55082200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr14:55078800-55089400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr14:55078800-55094000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr14:55078800-55094000 Weak transcription HSMMtube muscle
38 chr14:55079000-55081200 Weak transcription Osteobl bone
39 chr14:55079000-55084000 Weak transcription NHDF-Ad bronchial
40 chr14:55079600-55084400 Weak transcription NHLF lung
41 chr14:55079600-55087600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr14:55080000-55089200 Weak transcription Primary B cells from peripheral blood blood
43 chr14:55080200-55081600 Enhancers A549 lung
44 chr14:55080200-55087200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr14:55080200-55089200 Weak transcription Left Ventricle heart
46 chr14:55080400-55080800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr14:55080400-55080800 Enhancers Fetal Heart heart
48 chr14:55080400-55080800 Genic enhancers HepG2 liver
49 chr14:55080600-55081600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr14:55080600-55081600 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015