Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:166476937-166478624	K562	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000248327	TF binding region

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10005378	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10017297	1.00[ASN][1000 genomes]
rs17046745	1.00[ASN][1000 genomes]
rs17046756	1.00[ASN][1000 genomes]
rs1914834	1.00[ASN][1000 genomes]
rs1914835	1.00[ASN][1000 genomes]
rs1914836	1.00[ASN][1000 genomes]
rs1914838	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28391070	1.00[ASN][1000 genomes]
rs28487969	1.00[ASN][1000 genomes]
rs28583482	0.94[ASN][1000 genomes]
rs4096263	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6819473	1.00[ASN][1000 genomes]
rs6831798	1.00[ASN][1000 genomes]
rs6855033	1.00[ASN][1000 genomes]
rs7658683	1.00[ASN][1000 genomes]
rs7659327	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7679286	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7694281	1.00[ASN][1000 genomes]
rs7694612	1.00[ASN][1000 genomes]
rs9992314	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv596052	chr4:166454826-166488615	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166475800-166477800	Enhancers	HUVEC	blood vessel

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