Variant report
| Variant | rs28478136 |
|---|---|
| Chromosome Location | chr3:49905750-49905751 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:49894600-49906400 | Weak transcription | Right Atrium | heart |
| 2 | chr3:49901600-49906000 | Enhancers | H1 Cell Line | embryonic stem cell |
| 3 | chr3:49901600-49906400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr3:49902600-49905800 | Flanking Active TSS | Fetal Brain Female | brain |
| 5 | chr3:49903200-49906200 | Weak transcription | Gastric | stomach |
| 6 | chr3:49903600-49906000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr3:49903800-49905800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 8 | chr3:49904200-49906400 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr3:49904600-49905800 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr3:49904600-49905800 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr3:49904800-49906200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 12 | chr3:49904800-49906400 | Flanking Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr3:49904800-49906400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 14 | chr3:49904800-49906800 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 15 | chr3:49905000-49906400 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr3:49905000-49906800 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
| 17 | chr3:49905200-49905800 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 18 | chr3:49905200-49906000 | Bivalent/Poised TSS | Brain Cingulate Gyrus | brain |
| 19 | chr3:49905200-49906400 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
| 20 | chr3:49905200-49906600 | Flanking Active TSS | Fetal Brain Male | brain |
| 21 | chr3:49905200-49906800 | Flanking Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr3:49905400-49905800 | Flanking Active TSS | H9 Cell Line | embryonic stem cell |
| 23 | chr3:49905400-49905800 | Bivalent Enhancer | Right Ventricle | heart |
| 24 | chr3:49905400-49906200 | Bivalent Enhancer | ES-I3 Cell Line | embryonic stem cell |
| 25 | chr3:49905400-49906200 | Bivalent/Poised TSS | Brain Angular Gyrus | brain |
| 26 | chr3:49905400-49906200 | Bivalent/Poised TSS | Brain Anterior Caudate | brain |
| 27 | chr3:49905400-49906400 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
| 28 | chr3:49905400-49906400 | Bivalent/Poised TSS | Brain Hippocampus Middle | brain |
| 29 | chr3:49905400-49906400 | Bivalent Enhancer | Fetal Intestine Small | intestine |
| 30 | chr3:49905400-49906600 | Flanking Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
| 31 | chr3:49905400-49907600 | Bivalent/Poised TSS | Brain Inferior Temporal Lobe | brain |
| 32 | chr3:49905600-49905800 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr3:49905600-49906400 | Bivalent Enhancer | Fetal Intestine Large | intestine |
| 34 | chr3:49905600-49907000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
