The 2.0 version of rSNPBase

Variant report

Variant rs61729114
Chromosome Location chr3:49946812-49946813
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49941800-49950200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr3:49943600-49950800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:49943800-49947600 Weak transcription Fetal Heart heart
4 chr3:49943800-49966000 Weak transcription Psoas Muscle Psoas
5 chr3:49944000-49947400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr3:49944000-49947600 Weak transcription Aorta Aorta
7 chr3:49944000-49947600 Weak transcription Fetal Lung lung
8 chr3:49944000-49949400 Weak transcription Right Atrium heart
9 chr3:49944000-49954000 Weak transcription NHDF-Ad bronchial
10 chr3:49944200-49947000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr3:49944200-49947400 Weak transcription Ovary ovary
12 chr3:49944200-49947600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:49944200-49947600 Weak transcription Fetal Brain Male brain
14 chr3:49944200-49948800 Weak transcription HSMMtube muscle
15 chr3:49944200-49949800 Weak transcription Colon Smooth Muscle Colon
16 chr3:49944200-49956200 Weak transcription Primary hematopoietic stem cells blood
17 chr3:49944200-49962000 Weak transcription HepG2 liver
18 chr3:49944200-49962000 Weak transcription HSMM muscle
19 chr3:49944200-49962000 Weak transcription NH-A brain
20 chr3:49944200-49966000 Weak transcription Rectal Smooth Muscle rectum
21 chr3:49944400-49947000 Weak transcription HMEC breast
22 chr3:49944400-49948000 Weak transcription Primary B cells from peripheral blood blood
23 chr3:49944400-49948800 Weak transcription Primary B cells from cord blood blood
24 chr3:49944400-49950400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr3:49944400-49950600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr3:49944400-49952600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:49944400-49952800 Weak transcription GM12878-XiMat blood
28 chr3:49944400-49955000 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr3:49944400-49966000 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr3:49944400-49966000 Weak transcription HUVEC blood vessel
31 chr3:49944600-49949600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr3:49944600-49950800 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr3:49944600-49961800 Weak transcription Hela-S3 cervix
34 chr3:49944800-49951400 Strong transcription Fetal Muscle Leg muscle
35 chr3:49945000-49947200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr3:49945000-49947400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:49945000-49950800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr3:49945200-49947000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr3:49945200-49947800 Strong transcription NHEK skin
40 chr3:49945200-49948600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr3:49945200-49950800 Strong transcription Fetal Muscle Trunk muscle
42 chr3:49945200-49950800 Strong transcription Fetal Stomach stomach
43 chr3:49945400-49950800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:49945400-49950800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr3:49945400-49950800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr3:49945400-49950800 Strong transcription Thymus Thymus
47 chr3:49945400-49951000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr3:49945600-49950000 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr3:49945600-49950600 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr3:49945600-49950800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015