The 2.0 version of rSNPBase

Variant report

Variant rs28485801
Chromosome Location chr15:83714274-83714275
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:83681600-83732000 Weak transcription Stomach Mucosa stomach
2 chr15:83683000-83723000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr15:83683400-83726600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr15:83695400-83714600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr15:83695800-83715400 Weak transcription HSMMtube muscle
6 chr15:83697800-83721000 Strong transcription Fetal Intestine Large intestine
7 chr15:83699000-83715800 Weak transcription Brain Substantia Nigra brain
8 chr15:83699000-83716800 Weak transcription Aorta Aorta
9 chr15:83699000-83725800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr15:83700400-83734400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr15:83701600-83732800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr15:83705000-83720800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr15:83705000-83725800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr15:83705000-83731000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr15:83705200-83715000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr15:83705200-83720000 Strong transcription Dnd41 blood
17 chr15:83705600-83714400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr15:83705600-83721400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:83706000-83725400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr15:83706600-83718000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr15:83706800-83726600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr15:83707000-83725400 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr15:83707400-83718400 Strong transcription Fetal Muscle Leg muscle
24 chr15:83707400-83725400 Strong transcription HUES6 Cell Line embryonic stem cell
25 chr15:83707800-83719200 Strong transcription GM12878-XiMat blood
26 chr15:83708000-83718000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr15:83708000-83718200 Strong transcription H1 Cell Line embryonic stem cell
28 chr15:83708000-83722000 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr15:83708000-83725400 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr15:83708200-83714400 Strong transcription Fetal Intestine Small intestine
31 chr15:83708200-83714400 Strong transcription Fetal Stomach stomach
32 chr15:83708600-83715400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr15:83708600-83719800 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr15:83708600-83726000 Strong transcription Primary monocytes fromperipheralblood blood
35 chr15:83708800-83726400 Strong transcription Primary T cells fromperipheralblood blood
36 chr15:83708800-83726600 Weak transcription Pancreas Pancrea
37 chr15:83709000-83726600 Weak transcription Brain Inferior Temporal Lobe brain
38 chr15:83709000-83726600 Weak transcription Fetal Brain Male brain
39 chr15:83709200-83716200 Weak transcription Placenta Amnion Placenta Amnion
40 chr15:83709200-83724400 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr15:83709200-83727000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr15:83709600-83730800 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr15:83710400-83714600 Weak transcription Colon Smooth Muscle Colon
44 chr15:83710400-83716200 Weak transcription Psoas Muscle Psoas
45 chr15:83710400-83722800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr15:83710600-83714800 Weak transcription Primary hematopoietic stem cells blood
47 chr15:83710600-83715200 Weak transcription Brain Hippocampus Middle brain
48 chr15:83710600-83715200 Weak transcription NHEK skin
49 chr15:83710600-83715200 Weak transcription NHLF lung
50 chr15:83710600-83715400 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015