Variant report
Variant | rs2851902 |
---|---|
Chromosome Location | chr18:12050705-12050706 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:45)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:45 , 50 per page) page:
1
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | PAX5 | chr18:12050337-12050879 | GM12878 | blood: | n/a | chr18:12050475-12050484 |
2 | SPI1 | chr18:12049975-12050967 | GM12891 | blood: | n/a | chr18:12050034-12050043 chr18:12050509-12050516 chr18:12050475-12050484 |
3 | ATF2 | chr18:12049934-12050725 | GM12878 | blood: | n/a | n/a |
4 | IKZF1 | chr18:12049927-12050870 | GM12878 | blood: | n/a | n/a |
5 | YY1 | chr18:12050391-12050778 | GM12891 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
6 | SPI1 | chr18:12050211-12050713 | HL-60 | blood: | n/a | chr18:12050509-12050516 chr18:12050475-12050484 |
7 | MTA3 | chr18:12050242-12050894 | GM12878 | blood: | n/a | n/a |
8 | SPI1 | chr18:12050050-12050924 | GM12891 | blood: | n/a | chr18:12050509-12050516 chr18:12050475-12050484 |
9 | CHD2 | chr18:12050177-12050767 | GM12878 | blood: | n/a | n/a |
10 | STAT5A | chr18:12050226-12050707 | GM12878 | blood: | n/a | n/a |
11 | IRF4 | chr18:12050131-12050759 | GM12878 | blood: | n/a | n/a |
12 | YY1 | chr18:12050286-12050833 | GM12878 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
13 | NFIC | chr18:12049896-12050982 | GM12878 | blood: | n/a | n/a |
14 | SPI1 | chr18:12050066-12050992 | HL-60 | blood: | n/a | chr18:12050509-12050516 chr18:12050475-12050484 |
15 | RUNX3 | chr18:12049968-12051005 | GM12878 | blood: | n/a | n/a |
16 | TBL1XR1 | chr18:12049941-12050772 | GM12878 | blood: | n/a | n/a |
17 | WRNIP1 | chr18:12050293-12050729 | GM12878 | blood: | n/a | n/a |
18 | YY1 | chr18:12050321-12050730 | GM12892 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
19 | BHLHE40 | chr18:12050097-12050797 | GM12878 | blood: | n/a | n/a |
20 | PAX5 | chr18:12050440-12050822 | GM12891 | blood: | n/a | chr18:12050475-12050484 |
21 | EBF1 | chr18:12050188-12050796 | GM12878 | blood: | n/a | n/a |
22 | PAX5 | chr18:12050189-12050989 | GM12878 | blood: | n/a | chr18:12050475-12050484 |
23 | PAX5 | chr18:12050601-12050823 | GM12892 | blood: | n/a | n/a |
24 | EP300 | chr18:12050037-12050932 | GM12878 | blood: | n/a | chr18:12050475-12050489 |
25 | TCF12 | chr18:12050419-12050945 | ECC-1 | luminal epithelium: | n/a | chr18:12050695-12050702 |
26 | CUX1 | chr18:12050245-12050737 | GM12878 | blood: | n/a | n/a |
27 | RUNX3 | chr18:12049863-12050981 | GM12878 | blood: | n/a | n/a |
28 | NFIC | chr18:12049995-12050914 | GM12878 | blood: | n/a | n/a |
29 | MEF2A | chr18:12049942-12050713 | GM12878 | blood: | n/a | n/a |
30 | EBF1 | chr18:12050291-12050860 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr18:12050008-12050716 | GM12878 | blood: | n/a | chr18:12050475-12050484 chr18:12050034-12050043 |
32 | PAX5 | chr18:12050306-12050882 | GM12878 | blood: | n/a | chr18:12050475-12050484 |
33 | PAX5 | chr18:12050540-12050806 | GM12892 | blood: | n/a | n/a |
34 | MTA3 | chr18:12049903-12050961 | GM12878 | blood: | n/a | n/a |
35 | SPI1 | chr18:12050012-12050922 | GM12878 | blood: | n/a | chr18:12050034-12050043 chr18:12050509-12050516 chr18:12050475-12050484 |
36 | YY1 | chr18:12050261-12050708 | GM12891 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
37 | FOXM1 | chr18:12050220-12050733 | GM12878 | blood: | n/a | n/a |
38 | YY1 | chr18:12050285-12050840 | GM12892 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
39 | PAX5 | chr18:12050317-12050926 | GM12878 | blood: | n/a | chr18:12050475-12050484 |
40 | NFIC | chr18:12050372-12051012 | ECC-1 | luminal epithelium: | n/a | n/a |
41 | RELA | chr18:12050209-12050761 | GM19099 | blood: | n/a | n/a |
42 | EP300 | chr18:12050119-12050815 | GM12878 | blood: | n/a | chr18:12050475-12050489 |
43 | YY1 | chr18:12050266-12050787 | GM12878 | blood: | n/a | chr18:12050531-12050541 chr18:12050530-12050538 |
44 | IRF4 | chr18:12050083-12050758 | GM12878 | blood: | n/a | n/a |
45 | NFIC | chr18:12050350-12050971 | ECC-1 | luminal epithelium: | n/a | n/a |
No data |
No data |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000267292 | TF binding region |
rs_ID | r2[population] |
---|---|
rs11872277 | 0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11872729 | 0.85[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11875081 | 0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11875970 | 0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11876652 | 0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11876694 | 0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11876698 | 0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12953431 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12953485 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12953958 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12954230 | 0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12963290 | 0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12965804 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12965831 | 0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12965945 | 0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12966234 | 0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs12966286 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12970450 | 0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12970461 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs1942851 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs1942852 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2006690 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2849393 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2849401 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2849402 | 0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2849404 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2849405 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2849414 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2849415 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2849416 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2849418 | 0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2849420 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2851900 | 0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2851901 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2851903 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2851906 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2851915 | 0.83[ASN][1000 genomes] |
rs2851916 | 0.86[ASN][1000 genomes] |
rs2851919 | 0.89[EUR][1000 genomes] |
rs2851922 | 0.92[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28535741 | 0.84[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28567958 | 0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4271655 | 0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs4321255 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4359510 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4399596 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4399597 | 0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4516292 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4617931 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4643402 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4796944 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4797612 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4797613 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4797615 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4797616 | 0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4797617 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4797618 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs56076781 | 0.81[ASN][1000 genomes] |
rs57512036 | 0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6505710 | 0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6505712 | 0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7230733 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7231001 | 0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7231981 | 0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7236715 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7237502 | 0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs7237877 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7242326 | 0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs7242561 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7242892 | 0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs727746 | 0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7506731 | 0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs8083240 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs8099334 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs948752 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs949229 | 1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs949230 | 0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs949231 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs949232 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs949233 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs9952038 | 0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9959517 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9959561 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9959774 | 0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9959781 | 0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9960429 | 0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs9960443 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1055453 | chr18:11776790-12110135 | Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 66 gene(s) | inside rSNPs | diseases |
2 | nsv543654 | chr18:11776790-12110135 | Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 66 gene(s) | inside rSNPs | diseases |
3 | esv2758470 | chr18:11897023-12076102 | Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 35 gene(s) | inside rSNPs | diseases |
4 | esv2758713 | chr18:11897023-12076102 | Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 35 gene(s) | inside rSNPs | diseases |
5 | nsv909384 | chr18:11907374-12101109 | Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 42 gene(s) | inside rSNPs | diseases |
6 | nsv909386 | chr18:11938102-12095950 | Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
7 | nsv909388 | chr18:11987988-12141372 | Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
8 | nsv909389 | chr18:11987988-12141625 | Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
9 | nsv909390 | chr18:11987988-12155371 | Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
10 | nsv909391 | chr18:11989416-12146408 | Active TSS Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
11 | nsv909392 | chr18:11989416-12146698 | Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
12 | nsv909393 | chr18:12001258-12155371 | Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
13 | nsv909394 | chr18:12017343-12141372 | Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
14 | nsv1063125 | chr18:12046892-12918251 | Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 130 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr18:12048200-12051000 | Enhancers | Primary monocytes fromperipheralblood | blood |
2 | chr18:12048200-12051000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
3 | chr18:12048600-12050800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
4 | chr18:12048600-12050800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
5 | chr18:12048800-12051200 | Weak transcription | Duodenum Mucosa | Duodenum |
6 | chr18:12049000-12052400 | Weak transcription | HSMM | muscle |
7 | chr18:12049000-12060000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
8 | chr18:12049200-12052200 | Weak transcription | HSMMtube | muscle |
9 | chr18:12049800-12050800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
10 | chr18:12049800-12050800 | Active TSS | Rectal Mucosa Donor 29 | rectum |
11 | chr18:12050200-12050800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
12 | chr18:12050200-12052800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
13 | chr18:12050400-12050800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
14 | chr18:12050600-12050800 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
15 | chr18:12050600-12050800 | Enhancers | Colonic Mucosa | Colon |
16 | chr18:12050600-12050800 | Flanking Active TSS | GM12878-XiMat | blood |
17 | chr18:12050600-12051200 | Enhancers | Monocytes-CD14+_RO01746 | blood |
18 | chr18:12050600-12051400 | Enhancers | Primary B cells from cord blood | blood |