The 2.0 version of rSNPBase

Variant report

Variant rs28526796
Chromosome Location chr21:17848139-17848140
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17836800-17848400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr21:17836800-17848600 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr21:17837400-17848800 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr21:17838000-17850200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr21:17840400-17848200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr21:17840400-17860800 Weak transcription HUVEC blood vessel
7 chr21:17841000-17881800 Weak transcription Hela-S3 cervix
8 chr21:17841400-17848200 Weak transcription Muscle Satellite Cultured Cells --
9 chr21:17846000-17849400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr21:17846600-17848600 Weak transcription Colon Smooth Muscle Colon
11 chr21:17846600-17848800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr21:17846600-17848800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr21:17846600-17859400 Weak transcription Ovary ovary
14 chr21:17846800-17848200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr21:17846800-17848400 Weak transcription Brain Hippocampus Middle brain
16 chr21:17846800-17848600 Weak transcription Fetal Heart heart
17 chr21:17846800-17848600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr21:17846800-17848800 Weak transcription Fetal Lung lung
19 chr21:17846800-17849600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr21:17846800-17864000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr21:17847000-17848400 Weak transcription Brain Anterior Caudate brain
22 chr21:17847000-17848800 Weak transcription Osteobl bone
23 chr21:17847600-17848400 Weak transcription Brain Substantia Nigra brain
24 chr21:17847600-17848600 Weak transcription Adipose Nuclei Adipose
25 chr21:17847600-17848800 Weak transcription Brain Angular Gyrus brain
26 chr21:17847600-17848800 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015