The 2.0 version of rSNPBase

Variant report

Variant rs9980549
Chromosome Location chr21:17882089-17882090
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:14 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17873000-17883800 Weak transcription Fetal Brain Female brain
2 chr21:17873200-17886400 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr21:17873200-17886400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr21:17877600-17889600 Weak transcription Muscle Satellite Cultured Cells --
5 chr21:17878800-17889400 Weak transcription Ovary ovary
6 chr21:17879000-17891400 Weak transcription Fetal Brain Male brain
7 chr21:17881600-17882400 Enhancers Osteobl bone
8 chr21:17881600-17882600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr21:17881600-17882800 Enhancers NHDF-Ad bronchial
10 chr21:17881800-17882200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr21:17881800-17882600 Strong transcription Hela-S3 cervix
12 chr21:17882000-17882400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr21:17882000-17882400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr21:17882000-17882600 Enhancers NHLF lung

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Last update: Aug 31, 2015