Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:85748202..85749930-chr6:85751489..85754469,2	K562	blood:
2	chr6:85744346..85746555-chr6:85751117..85753543,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10806289	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11753876	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11756244	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11962597	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11965624	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11965782	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11965808	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16875500	0.84[EUR][1000 genomes]
rs16879799	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17194619	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17802851	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17802995	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35593857	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56046103	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66513010	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66904123	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67475583	0.84[EUR][1000 genomes]
rs67785337	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6930127	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7743053	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021282	chr6:85081075-85820057	Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1017418	chr6:85344786-86259540	Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Strong transcription Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
3	nsv538347	chr6:85344786-86259540	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:85750600-85752200	Enhancers	HUVEC	blood vessel
2	chr6:85751000-85751600	Weak transcription	K562	blood
3	chr6:85751400-85752800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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