Variant report

Variant rs2857770
Chromosome Location chr6:29634716-29634717
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29625000-29663600 Weak transcription Right Atrium heart
2 chr6:29630800-29643200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:29631400-29640200 Weak transcription NHEK skin
4 chr6:29631800-29635200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr6:29632000-29636200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:29632000-29638600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:29633400-29635200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr6:29633400-29635600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr6:29633400-29635600 Genic enhancers Brain Substantia Nigra brain
10 chr6:29633400-29636000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
11 chr6:29633400-29636400 Enhancers Fetal Heart heart
12 chr6:29633600-29635000 Genic enhancers Brain Cingulate Gyrus brain
13 chr6:29633600-29635000 Enhancers Brain Inferior Temporal Lobe brain
14 chr6:29633600-29635400 Genic enhancers Brain Hippocampus Middle brain
15 chr6:29633600-29636600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr6:29633800-29634800 Enhancers GM12878-XiMat blood
17 chr6:29633800-29635000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
18 chr6:29633800-29635000 Active TSS ES-WA7 Cell Line embryonic stem cell
19 chr6:29633800-29635800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:29633800-29636600 Enhancers H9 Cell Line embryonic stem cell
21 chr6:29634000-29636200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:29634200-29635400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr6:29634400-29634800 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr6:29634400-29635000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
25 chr6:29634400-29635600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
26 chr6:29634400-29635800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
27 chr6:29634400-29636200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr6:29634600-29635000 Flanking Active TSS H1 Cell Line embryonic stem cell
29 chr6:29634600-29635200 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr6:29634600-29635400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:29634600-29635600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
32 chr6:29634600-29636400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr6:29634600-29641000 Weak transcription Brain Anterior Caudate brain
34 chr6:29634600-29642000 Weak transcription Brain Angular Gyrus brain

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