Variant report
| Variant | rs28595853 |
|---|---|
| Chromosome Location | chr4:152580058-152580059 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:152563800-152625200 | Weak transcription | Hela-S3 | cervix |
| 2 | chr4:152564200-152595200 | Weak transcription | Aorta | Aorta |
| 3 | chr4:152567400-152608600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr4:152567800-152609000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 5 | chr4:152570600-152582200 | Weak transcription | Spleen | Spleen |
| 6 | chr4:152571200-152584200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 7 | chr4:152571200-152584200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr4:152571600-152583600 | Weak transcription | Ovary | ovary |
| 9 | chr4:152571600-152595000 | Weak transcription | HepG2 | liver |
| 10 | chr4:152574400-152582800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr4:152575000-152580200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 12 | chr4:152575400-152582000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr4:152575600-152580600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 14 | chr4:152576800-152580400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 15 | chr4:152577200-152580200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 16 | chr4:152577200-152580800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 17 | chr4:152577200-152581000 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 18 | chr4:152577200-152581400 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 19 | chr4:152577200-152585000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 20 | chr4:152577400-152580200 | Strong transcription | Fetal Intestine Large | intestine |
| 21 | chr4:152577400-152580200 | Strong transcription | HMEC | breast |
| 22 | chr4:152577400-152580400 | Strong transcription | Pancreas | Pancrea |
| 23 | chr4:152577400-152580800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 24 | chr4:152577400-152580800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 25 | chr4:152577400-152581600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 26 | chr4:152578000-152581400 | Strong transcription | Left Ventricle | heart |
| 27 | chr4:152578400-152580800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 28 | chr4:152578400-152595200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 29 | chr4:152578600-152580200 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 30 | chr4:152578800-152581200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr4:152579000-152583400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr4:152579200-152584000 | Weak transcription | Colonic Mucosa | Colon |
| 33 | chr4:152579200-152597400 | Weak transcription | Liver | Liver |
| 34 | chr4:152579400-152581000 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 35 | chr4:152579400-152582400 | Enhancers | Psoas Muscle | Psoas |
| 36 | chr4:152579600-152580200 | Weak transcription | Fetal Stomach | stomach |
| 37 | chr4:152579600-152580400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 38 | chr4:152579600-152580800 | Enhancers | Thymus | Thymus |
| 39 | chr4:152579600-152581200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 40 | chr4:152579600-152581400 | Enhancers | Fetal Thymus | thymus |
| 41 | chr4:152579600-152581800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 42 | chr4:152579600-152583200 | Weak transcription | Esophagus | oesophagus |
| 43 | chr4:152579600-152584400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 44 | chr4:152579600-152585000 | Weak transcription | Gastric | stomach |
| 45 | chr4:152579600-152587600 | Weak transcription | NHEK | skin |
| 46 | chr4:152579600-152592200 | Weak transcription | Right Ventricle | heart |
| 47 | chr4:152579800-152580200 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 48 | chr4:152579800-152580600 | Enhancers | Colon Smooth Muscle | Colon |
| 49 | chr4:152579800-152581200 | Weak transcription | Fetal Intestine Small | intestine |
| 50 | chr4:152579800-152581200 | Enhancers | HUVEC | blood vessel |
