The 2.0 version of rSNPBase

Variant report

Variant rs28600971
Chromosome Location chr4:119712728-119712729
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:119625800-119718000 Weak transcription Hela-S3 cervix
2 chr4:119678600-119717400 Weak transcription Esophagus oesophagus
3 chr4:119679000-119717600 Weak transcription Colonic Mucosa Colon
4 chr4:119688600-119712800 Weak transcription Gastric stomach
5 chr4:119688600-119715800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr4:119688600-119717400 Weak transcription Primary hematopoietic stem cells blood
7 chr4:119688600-119717400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr4:119688600-119732600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr4:119688800-119716800 Weak transcription Fetal Kidney kidney
10 chr4:119689400-119716200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr4:119689400-119716600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr4:119689400-119716800 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr4:119689600-119717600 Weak transcription K562 blood
14 chr4:119690000-119717600 Weak transcription Primary T cells from cord blood blood
15 chr4:119694000-119715000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr4:119694000-119717400 Weak transcription Ovary ovary
17 chr4:119694400-119716600 Weak transcription Aorta Aorta
18 chr4:119695000-119717600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr4:119696400-119715600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr4:119696800-119717400 Weak transcription Spleen Spleen
21 chr4:119702600-119717600 Weak transcription Fetal Brain Male brain
22 chr4:119703400-119732200 Strong transcription Primary monocytes fromperipheralblood blood
23 chr4:119703800-119738200 Strong transcription Placenta Placenta
24 chr4:119704200-119713000 Weak transcription Lung lung
25 chr4:119704200-119740000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr4:119704400-119714000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:119704400-119717600 Weak transcription Pancreas Pancrea
28 chr4:119704600-119715600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:119704600-119716400 Weak transcription H9 Cell Line embryonic stem cell
30 chr4:119704600-119717600 Weak transcription Small Intestine intestine
31 chr4:119704800-119713600 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr4:119704800-119715600 Weak transcription Primary B cells from cord blood blood
33 chr4:119704800-119735200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:119705200-119713200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr4:119705200-119714600 Weak transcription HepG2 liver
36 chr4:119705200-119716400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr4:119705200-119716400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr4:119705200-119716600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr4:119705200-119717400 Weak transcription Left Ventricle heart
40 chr4:119705200-119717400 Weak transcription HMEC breast
41 chr4:119705200-119717600 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr4:119705200-119717800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr4:119705200-119721200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr4:119705200-119748200 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr4:119705600-119714000 Weak transcription Duodenum Mucosa Duodenum
46 chr4:119705600-119715400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr4:119706400-119712800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr4:119706400-119716600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr4:119706600-119713000 Strong transcription Muscle Satellite Cultured Cells --
50 chr4:119706800-119714800 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015