Variant report

Variant	rs28608891
Chromosome Location	chr4:30768739-30768740
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10019730	0.84[AFR][1000 genomes]
rs10030137	0.84[AFR][1000 genomes]
rs13353549	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1447370	0.83[AMR][1000 genomes]
rs16884029	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs16884077	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs16884127	0.83[AMR][1000 genomes]
rs16884144	0.83[AMR][1000 genomes]
rs16884156	0.83[AMR][1000 genomes]
rs28604938	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28715457	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs41530644	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73213179	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73213199	0.83[AMR][1000 genomes]
rs73213201	0.83[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30737400-30770800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:30759200-30770800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:30760400-30769000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr4:30762800-30770400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr4:30763000-30770400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr4:30763000-30770800	Weak transcription	Aorta	Aorta
7	chr4:30764200-30773000	Enhancers	HUVEC	blood vessel
8	chr4:30765400-30770000	Weak transcription	Fetal Lung	lung
9	chr4:30765600-30769000	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr4:30765800-30769800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr4:30765800-30769800	Weak transcription	Colon Smooth Muscle	Colon
12	chr4:30766000-30768800	Weak transcription	Stomach Smooth Muscle	stomach
13	chr4:30766000-30770000	Weak transcription	Fetal Stomach	stomach
14	chr4:30766000-30771000	Weak transcription	Rectal Smooth Muscle	rectum
15	chr4:30766000-30778000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr4:30766200-30770800	Weak transcription	Brain Hippocampus Middle	brain
17	chr4:30767200-30770800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr4:30767400-30770800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr4:30767600-30768800	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr4:30767600-30769000	Weak transcription	NHEK	skin
21	chr4:30767600-30769200	Weak transcription	HUES48 Cell Line	embryonic stem cell
22	chr4:30767600-30769800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
23	chr4:30767800-30769000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr4:30767800-30769200	Weak transcription	Fetal Heart	heart
25	chr4:30767800-30770000	Weak transcription	Hela-S3	cervix
26	chr4:30768600-30769200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr4:30768600-30769400	Enhancers	HMEC	breast

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