The 2.0 version of rSNPBase

Variant report

Variant rs28615641
Chromosome Location chr2:234085469-234085470
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234052600-234088400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr2:234053800-234086000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr2:234053800-234087800 Strong transcription Fetal Thymus thymus
4 chr2:234053800-234093200 Strong transcription Primary B cells from peripheral blood blood
5 chr2:234053800-234110800 Strong transcription Primary T helper naive cells fromperipheralblood blood
6 chr2:234053800-234113800 Strong transcription Primary T cells from cord blood blood
7 chr2:234053800-234118000 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr2:234054400-234110600 Weak transcription Small Intestine intestine
9 chr2:234055200-234113400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:234058600-234105400 Weak transcription Rectal Smooth Muscle rectum
11 chr2:234060000-234087800 Weak transcription NHEK skin
12 chr2:234061600-234094600 Weak transcription Brain Anterior Caudate brain
13 chr2:234061800-234087600 Weak transcription Brain Hippocampus Middle brain
14 chr2:234062000-234108400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:234074200-234111200 Weak transcription Brain Substantia Nigra brain
16 chr2:234074600-234122000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:234074800-234101000 Strong transcription Primary hematopoietic stem cells blood
18 chr2:234075000-234100000 Weak transcription HUVEC blood vessel
19 chr2:234075200-234087400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr2:234075200-234094200 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr2:234075200-234111800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:234075200-234117000 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr2:234075400-234087400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr2:234075400-234087400 Strong transcription Spleen Spleen
25 chr2:234075400-234087400 Weak transcription K562 blood
26 chr2:234075400-234088000 Strong transcription Primary B cells from cord blood blood
27 chr2:234075400-234111200 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr2:234075400-234113800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:234075400-234115200 Strong transcription Primary T cells fromperipheralblood blood
30 chr2:234076000-234088000 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr2:234076400-234087600 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr2:234076400-234088000 Strong transcription Primary monocytes fromperipheralblood blood
33 chr2:234077000-234086000 Strong transcription Primary T killer naive cells fromperipheralblood blood
34 chr2:234077000-234086400 Strong transcription Primary T killer memory cells from peripheral blood blood
35 chr2:234077200-234117200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
36 chr2:234077400-234087400 Weak transcription Pancreas Pancrea
37 chr2:234077800-234106400 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr2:234078000-234088400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr2:234078200-234087800 Weak transcription H9 Cell Line embryonic stem cell
40 chr2:234078200-234088800 Weak transcription Fetal Muscle Leg muscle
41 chr2:234078200-234110000 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr2:234078400-234087800 Weak transcription H1 Cell Line embryonic stem cell
43 chr2:234078400-234088400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr2:234078600-234087800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr2:234078800-234087600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:234078800-234098600 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr2:234079200-234087600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:234079200-234087600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:234079200-234087600 Weak transcription Fetal Stomach stomach
50 chr2:234079200-234088400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015