Variant report
| Variant | rs55801407 |
|---|---|
| Chromosome Location | chr2:234071162-234071163 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:234052400-234074400 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr2:234052600-234088400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 3 | chr2:234053400-234077600 | Weak transcription | Left Ventricle | heart |
| 4 | chr2:234053600-234076800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr2:234053600-234076800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr2:234053600-234077000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr2:234053800-234071400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 8 | chr2:234053800-234071400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 9 | chr2:234053800-234071400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 10 | chr2:234053800-234072400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 11 | chr2:234053800-234072600 | Strong transcription | Primary B cells from cord blood | blood |
| 12 | chr2:234053800-234073000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 13 | chr2:234053800-234073000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 14 | chr2:234053800-234073200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 15 | chr2:234053800-234073200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 16 | chr2:234053800-234073400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 17 | chr2:234053800-234086000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 18 | chr2:234053800-234087800 | Strong transcription | Fetal Thymus | thymus |
| 19 | chr2:234053800-234093200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 20 | chr2:234053800-234110800 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 21 | chr2:234053800-234113800 | Strong transcription | Primary T cells from cord blood | blood |
| 22 | chr2:234053800-234118000 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 23 | chr2:234054000-234073600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 24 | chr2:234054400-234110600 | Weak transcription | Small Intestine | intestine |
| 25 | chr2:234054600-234076200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr2:234055200-234113400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 27 | chr2:234056400-234074200 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr2:234056600-234078400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 29 | chr2:234056800-234077400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 30 | chr2:234057200-234077000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr2:234058600-234105400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 32 | chr2:234059000-234073800 | Weak transcription | Gastric | stomach |
| 33 | chr2:234060000-234087800 | Weak transcription | NHEK | skin |
| 34 | chr2:234061600-234094600 | Weak transcription | Brain Anterior Caudate | brain |
| 35 | chr2:234061800-234074000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr2:234061800-234087600 | Weak transcription | Brain Hippocampus Middle | brain |
| 37 | chr2:234062000-234108400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 38 | chr2:234062200-234072400 | Weak transcription | Fetal Muscle Leg | muscle |
| 39 | chr2:234062600-234084600 | Strong transcription | GM12878-XiMat | blood |
| 40 | chr2:234064400-234073000 | Strong transcription | Primary hematopoietic stem cells | blood |
| 41 | chr2:234065400-234075400 | Strong transcription | HepG2 | liver |
| 42 | chr2:234065600-234071400 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 43 | chr2:234066400-234073800 | Strong transcription | HMEC | breast |
| 44 | chr2:234067000-234071600 | Strong transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 45 | chr2:234067000-234072400 | Strong transcription | Placenta | Placenta |
| 46 | chr2:234067400-234074600 | Weak transcription | HUVEC | blood vessel |
| 47 | chr2:234067800-234078400 | Weak transcription | Right Ventricle | heart |
| 48 | chr2:234068000-234071400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 49 | chr2:234068600-234071800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 50 | chr2:234068600-234072000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
