The 2.0 version of rSNPBase

Variant report

Variant rs28631807
Chromosome Location chr1:95193160-95193161
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
3 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
4 chr1:95173400-95200600 Weak transcription Right Atrium heart
5 chr1:95179600-95193800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:95186200-95211400 Weak transcription Gastric stomach
7 chr1:95187000-95193800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:95189800-95193800 Weak transcription Spleen Spleen
9 chr1:95189800-95200400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:95190000-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells blood
12 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:95190400-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:95190600-95194000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:95190600-95195600 Enhancers HMEC breast
16 chr1:95190800-95194600 Enhancers Placenta Amnion Placenta Amnion
17 chr1:95190800-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:95191000-95194200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:95191000-95198200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:95191000-95198200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:95191400-95193200 Enhancers Fetal Intestine Large intestine
22 chr1:95191600-95194200 Enhancers HepG2 liver
23 chr1:95191600-95195400 Enhancers NHLF lung
24 chr1:95191800-95193200 Enhancers Duodenum Mucosa Duodenum
25 chr1:95191800-95193200 Genic enhancers Fetal Intestine Small intestine
26 chr1:95191800-95195600 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:95192400-95195000 Enhancers NHDF-Ad bronchial
28 chr1:95192600-95193200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:95192600-95193400 Enhancers A549 lung
30 chr1:95192600-95194000 Enhancers Ovary ovary
31 chr1:95192600-95194200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:95192600-95194200 Enhancers Placenta Placenta
33 chr1:95192600-95194400 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr1:95192600-95194800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:95192600-95194800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:95192600-95194800 Enhancers Osteobl bone
37 chr1:95192600-95195400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:95192600-95195400 Enhancers NH-A brain
39 chr1:95192800-95193200 Flanking Active TSS NHEK skin
40 chr1:95192800-95194200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:95192800-95194200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:95192800-95194200 Enhancers Esophagus oesophagus
43 chr1:95192800-95194200 Enhancers Fetal Muscle Trunk muscle
44 chr1:95192800-95194200 Enhancers Lung lung
45 chr1:95192800-95194400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:95192800-95195400 Enhancers Muscle Satellite Cultured Cells --
47 chr1:95192800-95195600 Enhancers HSMM muscle
48 chr1:95193000-95193200 Enhancers Small Intestine intestine
49 chr1:95193000-95193200 Enhancers Stomach Mucosa stomach
50 chr1:95193000-95193200 Flanking Active TSS Hela-S3 cervix

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015