The 2.0 version of rSNPBase

Variant report

Variant rs11165228
Chromosome Location chr1:95190996-95190997
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
3 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
4 chr1:95173400-95200600 Weak transcription Right Atrium heart
5 chr1:95175800-95192600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:95175800-95193000 Weak transcription Fetal Stomach stomach
7 chr1:95179600-95193800 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr1:95182600-95191000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:95186200-95211400 Weak transcription Gastric stomach
10 chr1:95187000-95193800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:95187400-95191800 Enhancers Primary neutrophils fromperipheralblood blood
12 chr1:95189400-95191800 Strong transcription Fetal Intestine Small intestine
13 chr1:95189600-95192800 Weak transcription Fetal Muscle Trunk muscle
14 chr1:95189800-95192800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:95189800-95192800 Weak transcription Lung lung
16 chr1:95189800-95193800 Weak transcription Spleen Spleen
17 chr1:95189800-95200400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:95190000-95191000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:95190000-95191000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:95190000-95191000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:95190000-95191000 Weak transcription NHDF-Ad bronchial
22 chr1:95190000-95191600 Weak transcription HepG2 liver
23 chr1:95190000-95193000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:95190000-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells blood
26 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:95190400-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:95190600-95191000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:95190600-95191400 Weak transcription Fetal Intestine Large intestine
30 chr1:95190600-95194000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr1:95190600-95195600 Enhancers HMEC breast
32 chr1:95190800-95192800 Enhancers NHEK skin
33 chr1:95190800-95194600 Enhancers Placenta Amnion Placenta Amnion
34 chr1:95190800-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015