The 2.0 version of rSNPBase

Variant report

Variant rs2055076
Chromosome Location chr1:95193287-95193288
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
3 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
4 chr1:95173400-95200600 Weak transcription Right Atrium heart
5 chr1:95179600-95193800 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:95186200-95211400 Weak transcription Gastric stomach
7 chr1:95187000-95193800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:95189800-95193800 Weak transcription Spleen Spleen
9 chr1:95189800-95200400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:95190000-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells blood
12 chr1:95190000-95193800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:95190400-95193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:95190600-95194000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:95190600-95195600 Enhancers HMEC breast
16 chr1:95190800-95194600 Enhancers Placenta Amnion Placenta Amnion
17 chr1:95190800-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:95191000-95194200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:95191000-95198200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:95191000-95198200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:95191600-95194200 Enhancers HepG2 liver
22 chr1:95191600-95195400 Enhancers NHLF lung
23 chr1:95191800-95195600 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr1:95192400-95195000 Enhancers NHDF-Ad bronchial
25 chr1:95192600-95193400 Enhancers A549 lung
26 chr1:95192600-95194000 Enhancers Ovary ovary
27 chr1:95192600-95194200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:95192600-95194200 Enhancers Placenta Placenta
29 chr1:95192600-95194400 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:95192600-95194800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:95192600-95194800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:95192600-95194800 Enhancers Osteobl bone
33 chr1:95192600-95195400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:95192600-95195400 Enhancers NH-A brain
35 chr1:95192800-95194200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:95192800-95194200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:95192800-95194200 Enhancers Esophagus oesophagus
38 chr1:95192800-95194200 Enhancers Fetal Muscle Trunk muscle
39 chr1:95192800-95194200 Enhancers Lung lung
40 chr1:95192800-95194400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:95192800-95195400 Enhancers Muscle Satellite Cultured Cells --
42 chr1:95192800-95195600 Enhancers HSMM muscle
43 chr1:95193000-95194000 Enhancers Fetal Kidney kidney
44 chr1:95193000-95194000 Enhancers Fetal Lung lung
45 chr1:95193000-95194000 Enhancers Rectal Smooth Muscle rectum
46 chr1:95193000-95194200 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr1:95193000-95194200 Enhancers Fetal Stomach stomach
48 chr1:95193000-95194200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr1:95193000-95195000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:95193000-95195000 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015