The 2.0 version of rSNPBase

Variant report

Variant rs4847352
Chromosome Location chr1:95194690-95194691
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95152800-95195000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
3 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
4 chr1:95173400-95200600 Weak transcription Right Atrium heart
5 chr1:95186200-95211400 Weak transcription Gastric stomach
6 chr1:95189800-95200400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:95190600-95195600 Enhancers HMEC breast
8 chr1:95190800-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:95191000-95198200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:95191000-95198200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:95191600-95195400 Enhancers NHLF lung
12 chr1:95191800-95195600 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr1:95192400-95195000 Enhancers NHDF-Ad bronchial
14 chr1:95192600-95194800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:95192600-95194800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:95192600-95194800 Enhancers Osteobl bone
17 chr1:95192600-95195400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:95192600-95195400 Enhancers NH-A brain
19 chr1:95192800-95195400 Enhancers Muscle Satellite Cultured Cells --
20 chr1:95192800-95195600 Enhancers HSMM muscle
21 chr1:95193000-95195000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:95193000-95195000 Enhancers HUVEC blood vessel
23 chr1:95193000-95195200 Enhancers Fetal Muscle Leg muscle
24 chr1:95193000-95195400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:95193000-95195400 Enhancers HSMMtube muscle
26 chr1:95193200-95194800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:95193200-95195200 Weak transcription Small Intestine intestine
28 chr1:95193200-95196200 Enhancers NHEK skin
29 chr1:95193200-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:95193200-95200600 Weak transcription Stomach Mucosa stomach
31 chr1:95193200-95202200 Weak transcription Fetal Intestine Large intestine
32 chr1:95193800-95195000 Enhancers Adipose Nuclei Adipose
33 chr1:95194000-95195000 Weak transcription Fetal Lung lung
34 chr1:95194000-95200400 Weak transcription Ovary ovary
35 chr1:95194000-95202800 Weak transcription Rectal Smooth Muscle rectum
36 chr1:95194200-95195000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:95194200-95195000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr1:95194200-95195000 Enhancers Hela-S3 cervix
39 chr1:95194200-95195200 Weak transcription Aorta Aorta
40 chr1:95194200-95195200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:95194200-95195600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:95194200-95196200 Weak transcription Placenta Placenta
43 chr1:95194200-95196200 Weak transcription Fetal Stomach stomach
44 chr1:95194200-95199200 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr1:95194200-95199400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:95194200-95200400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:95194200-95200600 Weak transcription Lung lung
48 chr1:95194200-95200800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:95194200-95200800 Weak transcription Spleen Spleen
50 chr1:95194400-95194800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015