The 2.0 version of rSNPBase

Variant report

Variant rs28641142
Chromosome Location chr6:149450542-149450543
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149447600-149454400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr6:149447800-149454200 Enhancers Primary T helper cells fromperipheralblood blood
3 chr6:149448000-149452600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:149448200-149452200 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr6:149448400-149451200 Enhancers Primary T cells fromperipheralblood blood
6 chr6:149448400-149452400 Enhancers Primary hematopoietic stem cells blood
7 chr6:149448400-149452400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:149448600-149450600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr6:149448800-149452000 Enhancers Primary T cells from cord blood blood
10 chr6:149448800-149453600 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr6:149448800-149454200 Enhancers Placenta Placenta
12 chr6:149449000-149450600 Weak transcription Muscle Satellite Cultured Cells --
13 chr6:149449000-149452000 Enhancers NHLF lung
14 chr6:149449400-149451200 Enhancers Primary B cells from peripheral blood blood
15 chr6:149449400-149451600 Enhancers GM12878-XiMat blood
16 chr6:149449400-149452000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:149449600-149451000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:149449600-149452000 Enhancers Monocytes-CD14+_RO01746 blood
19 chr6:149449600-149452600 Enhancers Fetal Lung lung
20 chr6:149449800-149450800 Weak transcription Primary B cells from cord blood blood
21 chr6:149449800-149450800 Weak transcription Fetal Kidney kidney
22 chr6:149449800-149451000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr6:149449800-149451000 Enhancers Primary T killer naive cells fromperipheralblood blood
24 chr6:149449800-149451000 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr6:149449800-149451800 Enhancers Primary monocytes fromperipheralblood blood
26 chr6:149449800-149451800 Enhancers Hela-S3 cervix
27 chr6:149449800-149453600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr6:149449800-149454200 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr6:149449800-149455600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr6:149450000-149450800 Weak transcription Pancreas Pancrea
31 chr6:149450000-149451000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr6:149450000-149451000 Weak transcription Liver Liver
33 chr6:149450000-149451400 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr6:149450000-149451400 Weak transcription Fetal Stomach stomach
35 chr6:149450000-149452400 Weak transcription Stomach Mucosa stomach
36 chr6:149450000-149454400 Enhancers Primary T helper cells PMA-I stimulated --
37 chr6:149450000-149457000 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr6:149450000-149461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:149450200-149450600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:149450200-149451600 Weak transcription Fetal Thymus thymus
41 chr6:149450200-149451600 Weak transcription Lung lung
42 chr6:149450200-149452600 Weak transcription Gastric stomach
43 chr6:149450200-149452600 Enhancers Dnd41 blood
44 chr6:149450200-149453600 Weak transcription Spleen Spleen
45 chr6:149450200-149455800 Enhancers K562 blood
46 chr6:149450200-149461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr6:149450400-149450800 Weak transcription Esophagus oesophagus
48 chr6:149450400-149452000 Enhancers Osteobl bone
49 chr6:149450400-149452200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015