The 2.0 version of rSNPBase

Variant report

Variant rs55991942
Chromosome Location chr6:149452470-149452471
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149447600-149454400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr6:149447800-149454200 Enhancers Primary T helper cells fromperipheralblood blood
3 chr6:149448000-149452600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:149448800-149453600 Enhancers Primary T regulatory cells fromperipheralblood blood
5 chr6:149448800-149454200 Enhancers Placenta Placenta
6 chr6:149449600-149452600 Enhancers Fetal Lung lung
7 chr6:149449800-149453600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr6:149449800-149454200 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr6:149449800-149455600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr6:149450000-149454400 Enhancers Primary T helper cells PMA-I stimulated --
11 chr6:149450000-149457000 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr6:149450000-149461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr6:149450200-149452600 Weak transcription Gastric stomach
14 chr6:149450200-149452600 Enhancers Dnd41 blood
15 chr6:149450200-149453600 Weak transcription Spleen Spleen
16 chr6:149450200-149455800 Enhancers K562 blood
17 chr6:149450200-149461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:149450600-149453000 Enhancers Stomach Smooth Muscle stomach
19 chr6:149451000-149453200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr6:149451000-149453200 Weak transcription Esophagus oesophagus
21 chr6:149451000-149453600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr6:149451000-149453600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr6:149451200-149453200 Weak transcription Primary T cells fromperipheralblood blood
24 chr6:149451400-149452800 Enhancers Fetal Stomach stomach
25 chr6:149451400-149453800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr6:149451600-149453400 Weak transcription GM12878-XiMat blood
27 chr6:149451600-149455800 Weak transcription Fetal Kidney kidney
28 chr6:149451800-149452800 Weak transcription Placenta Amnion Placenta Amnion
29 chr6:149451800-149455800 Weak transcription Adipose Nuclei Adipose
30 chr6:149452000-149453000 Weak transcription Primary T cells from cord blood blood
31 chr6:149452000-149453600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr6:149452000-149453600 Weak transcription Lung lung
33 chr6:149452000-149454000 Weak transcription Fetal Thymus thymus
34 chr6:149452000-149455000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:149452000-149458000 Weak transcription Pancreas Pancrea
36 chr6:149452200-149453000 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr6:149452200-149455000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:149452400-149452600 Enhancers Stomach Mucosa stomach
39 chr6:149452400-149454000 Weak transcription Primary hematopoietic stem cells blood
40 chr6:149452400-149454400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015