The 2.0 version of rSNPBase

Variant report

Variant rs28660296
Chromosome Location chr4:86956564-86956565
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:86916800-86985400 Weak transcription Ovary ovary
2 chr4:86936000-86975600 Weak transcription Brain Germinal Matrix brain
3 chr4:86936400-86990600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr4:86938600-86957800 Weak transcription Fetal Brain Female brain
5 chr4:86944600-86963000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr4:86945400-86963200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr4:86948200-86966600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr4:86949200-86988600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr4:86950600-86959200 Weak transcription Fetal Brain Male brain
10 chr4:86950600-86967000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr4:86953200-86957000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr4:86953800-86959600 Enhancers HUVEC blood vessel
13 chr4:86954600-86958400 Enhancers Osteobl bone
14 chr4:86954600-86959000 Enhancers Muscle Satellite Cultured Cells --
15 chr4:86954600-86960400 Weak transcription Pancreas Pancrea
16 chr4:86954600-86960600 Weak transcription Left Ventricle heart
17 chr4:86954800-86956800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:86954800-86957000 Weak transcription Primary hematopoietic stem cells blood
19 chr4:86954800-86957800 Weak transcription HSMMtube muscle
20 chr4:86954800-86959000 Weak transcription Fetal Lung lung
21 chr4:86954800-86960400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr4:86955000-86956800 Weak transcription NHLF lung
23 chr4:86955000-86957000 Weak transcription Primary T cells from cord blood blood
24 chr4:86955000-86957200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr4:86955000-86958000 Weak transcription Hela-S3 cervix
26 chr4:86955000-86958200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:86955000-86959200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr4:86955000-86960400 Weak transcription Fetal Stomach stomach
29 chr4:86955000-86964400 Weak transcription Brain Anterior Caudate brain
30 chr4:86955000-86966400 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr4:86955000-86985000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr4:86955200-86956800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr4:86955200-86956800 Weak transcription NHEK skin
34 chr4:86955200-86957000 Weak transcription NHDF-Ad bronchial
35 chr4:86955200-86957200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr4:86955200-86957800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr4:86955200-86957800 Weak transcription Fetal Kidney kidney
38 chr4:86955200-86960200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr4:86955200-86962600 Weak transcription Aorta Aorta
40 chr4:86955200-86964400 Weak transcription Brain Substantia Nigra brain
41 chr4:86955200-86964800 Weak transcription Brain Angular Gyrus brain
42 chr4:86955200-86965000 Weak transcription Right Atrium heart
43 chr4:86955200-86966600 Weak transcription Brain Cingulate Gyrus brain
44 chr4:86955200-86971000 Weak transcription Brain Hippocampus Middle brain
45 chr4:86955200-87003800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr4:86955400-86957800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr4:86955600-86963000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr4:86956000-86956800 Weak transcription HMEC breast
49 chr4:86956000-86956800 Weak transcription NH-A brain
50 chr4:86956000-86957800 Weak transcription HSMM muscle

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Last update: Aug 31, 2015