The 2.0 version of rSNPBase

Variant report

Variant rs28690636
Chromosome Location chr4:26877473-26877474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26864400-26886600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr4:26864600-26885600 Weak transcription Thymus Thymus
3 chr4:26866000-26880400 Weak transcription Muscle Satellite Cultured Cells --
4 chr4:26866000-26881800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr4:26867200-26879000 Weak transcription Fetal Intestine Small intestine
6 chr4:26867200-26880000 Weak transcription Fetal Intestine Large intestine
7 chr4:26867200-26884200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr4:26869800-26886000 Weak transcription Fetal Stomach stomach
9 chr4:26870000-26879400 Weak transcription NHLF lung
10 chr4:26870000-26879600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:26870600-26881800 Weak transcription Brain Cingulate Gyrus brain
12 chr4:26870800-26879200 Weak transcription Small Intestine intestine
13 chr4:26870800-26880800 Weak transcription Stomach Mucosa stomach
14 chr4:26873000-26886200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr4:26873400-26877800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr4:26873400-26883600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr4:26873600-26879200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr4:26873600-26880000 Weak transcription NHEK skin
19 chr4:26873800-26880000 Weak transcription HMEC breast
20 chr4:26873800-26881200 Weak transcription Fetal Heart heart
21 chr4:26873800-26881400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:26875600-26879000 Weak transcription Primary hematopoietic stem cells blood
23 chr4:26875600-26879200 Weak transcription Primary B cells from cord blood blood
24 chr4:26875600-26881400 Weak transcription Right Atrium heart
25 chr4:26875600-26904600 Weak transcription Brain Anterior Caudate brain
26 chr4:26875800-26878000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr4:26875800-26879000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:26875800-26879200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr4:26875800-26880400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr4:26875800-26880400 Weak transcription Psoas Muscle Psoas
31 chr4:26875800-26888200 Weak transcription Adipose Nuclei Adipose
32 chr4:26876000-26877800 Weak transcription Fetal Muscle Leg muscle
33 chr4:26876000-26879200 Weak transcription Primary B cells from peripheral blood blood
34 chr4:26876000-26879200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:26876000-26879600 Weak transcription Fetal Muscle Trunk muscle
36 chr4:26876000-26880400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr4:26876000-26881400 Weak transcription Pancreas Pancrea
38 chr4:26876200-26877600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr4:26876200-26878600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr4:26876200-26879000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr4:26876200-26879200 Weak transcription Primary T cells fromperipheralblood blood
42 chr4:26876200-26879200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr4:26876400-26885600 Weak transcription Fetal Lung lung
44 chr4:26876600-26879000 Weak transcription Primary T cells from cord blood blood
45 chr4:26876600-26879800 Weak transcription Brain Substantia Nigra brain
46 chr4:26876800-26877600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr4:26877200-26877800 Enhancers Primary T helper cells fromperipheralblood blood
48 chr4:26877200-26878200 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr4:26877200-26879400 Enhancers Primary T helper cells PMA-I stimulated --
50 chr4:26877400-26878200 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015