The 2.0 version of rSNPBase

Variant report

Variant rs28445792
Chromosome Location chr4:26959797-26959798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26911600-26965800 Weak transcription HMEC breast
2 chr4:26923200-26965800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr4:26923200-26977200 Weak transcription Thymus Thymus
4 chr4:26923400-26960600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr4:26938600-26969000 Weak transcription Gastric stomach
6 chr4:26938800-26965600 Weak transcription NHLF lung
7 chr4:26939200-26969000 Weak transcription Pancreas Pancrea
8 chr4:26942000-26961000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr4:26944400-26965600 Weak transcription Brain Anterior Caudate brain
10 chr4:26949200-26965600 Weak transcription NH-A brain
11 chr4:26949400-26963400 Weak transcription Lung lung
12 chr4:26950000-26980200 Weak transcription Spleen Spleen
13 chr4:26950200-26979400 Weak transcription Ovary ovary
14 chr4:26951800-26960200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr4:26952600-26965600 Weak transcription Psoas Muscle Psoas
16 chr4:26952800-26963400 Weak transcription Fetal Muscle Leg muscle
17 chr4:26953200-26961400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:26955400-26959800 Weak transcription HSMM muscle
19 chr4:26955400-26962600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr4:26955400-26963600 Weak transcription HSMMtube muscle
21 chr4:26955600-26960600 Weak transcription Primary T cells fromperipheralblood blood
22 chr4:26955600-26960600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr4:26955600-26960600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:26955600-26963000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:26955600-26965600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr4:26955600-26965600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:26955600-26965600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr4:26955600-26965600 Weak transcription Muscle Satellite Cultured Cells --
29 chr4:26955600-26965600 Weak transcription Brain Cingulate Gyrus brain
30 chr4:26955600-26965600 Weak transcription Duodenum Mucosa Duodenum
31 chr4:26955600-26966400 Weak transcription Primary hematopoietic stem cells blood
32 chr4:26955800-26959800 Weak transcription Primary B cells from peripheral blood blood
33 chr4:26956000-26960200 Weak transcription Primary T cells from cord blood blood
34 chr4:26956000-26966400 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr4:26956200-26960400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:26956200-26960400 Weak transcription GM12878-XiMat blood
37 chr4:26956400-26960400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr4:26957200-26960600 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr4:26957400-26961400 Weak transcription Brain Hippocampus Middle brain
40 chr4:26957400-26961400 Weak transcription Brain Substantia Nigra brain
41 chr4:26957400-26961800 Weak transcription Colon Smooth Muscle Colon
42 chr4:26957400-26964600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr4:26957400-26966600 Weak transcription Small Intestine intestine
44 chr4:26957600-26964200 Weak transcription Fetal Lung lung
45 chr4:26957800-26960000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr4:26957800-26960600 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr4:26958000-26965600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr4:26958200-26960600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:26958200-26960800 Weak transcription Dnd41 blood
50 chr4:26958400-26960600 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015