The 2.0 version of rSNPBase

Variant report

Variant rs28733863
Chromosome Location chr4:27009680-27009681
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26978400-27019200 Weak transcription Fetal Intestine Small intestine
2 chr4:26980400-27019400 Weak transcription Left Ventricle heart
3 chr4:26985400-27019400 Weak transcription Esophagus oesophagus
4 chr4:26989000-27010000 Weak transcription Thymus Thymus
5 chr4:26989000-27010400 Weak transcription Fetal Thymus thymus
6 chr4:26989400-27024800 Weak transcription Psoas Muscle Psoas
7 chr4:26989600-27027000 Weak transcription HepG2 liver
8 chr4:26994800-27011000 Weak transcription Duodenum Mucosa Duodenum
9 chr4:26995000-27019000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr4:26995000-27028200 Weak transcription Pancreas Pancrea
11 chr4:26995400-27009800 Weak transcription Adipose Nuclei Adipose
12 chr4:26996200-27015400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr4:26996400-27026200 Weak transcription H9 Cell Line embryonic stem cell
14 chr4:26996600-27011800 Weak transcription Brain Anterior Caudate brain
15 chr4:26996600-27018400 Weak transcription Fetal Intestine Large intestine
16 chr4:26996600-27019200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr4:26996800-27019200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr4:26997400-27019200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr4:27001200-27029600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:27001600-27019000 Weak transcription Spleen Spleen
21 chr4:27002000-27019200 Weak transcription Lung lung
22 chr4:27002000-27019200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr4:27002200-27013000 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr4:27002600-27011200 Weak transcription Stomach Smooth Muscle stomach
25 chr4:27002800-27011800 Weak transcription Stomach Mucosa stomach
26 chr4:27002800-27026000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr4:27003400-27011600 Strong transcription Primary B cells from cord blood blood
28 chr4:27004000-27011000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr4:27004200-27027200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:27004800-27025000 Weak transcription H1 Cell Line embryonic stem cell
31 chr4:27005000-27011000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr4:27005000-27018000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr4:27005000-27019400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:27005400-27011800 Enhancers Osteobl bone
35 chr4:27005400-27017600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr4:27005600-27010400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr4:27005600-27012000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr4:27005600-27013400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr4:27005600-27019200 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr4:27005600-27019600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:27005600-27021800 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr4:27005800-27009800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:27005800-27010400 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr4:27005800-27010400 Weak transcription Primary hematopoietic stem cells blood
45 chr4:27005800-27011000 Weak transcription GM12878-XiMat blood
46 chr4:27005800-27019400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr4:27005800-27019400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr4:27005800-27019400 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr4:27006000-27010200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr4:27006000-27019200 Weak transcription HMEC breast

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Last update: Aug 31, 2015