| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv458029 |
chr18:10814334-11662151 |
Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv576480 |
chr18:10814334-11662151 |
Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1066659 |
chr18:11246502-11709409 |
Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1057976 |
chr18:11251898-11664914 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv543650 |
chr18:11251898-11664914 |
Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv833589 |
chr18:11293101-11454521 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv3336425 |
chr18:11328001-11375388 |
Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 8 |
nsv1056541 |
chr18:11336695-11558542 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv543651 |
chr18:11336695-11558542 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
rSNPs within LD-proxies of this variant (count:37)
