Variant report

Variant rs2871778
Chromosome Location chr19:36370352-36370353
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36360200-36379000 Weak transcription Aorta Aorta
2 chr19:36361000-36389000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:36361200-36370400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr19:36361200-36370400 Weak transcription NH-A brain
5 chr19:36361200-36389200 Weak transcription Right Atrium heart
6 chr19:36361800-36370400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr19:36361800-36370400 Strong transcription Fetal Brain Female brain
8 chr19:36362000-36370400 Strong transcription Brain Germinal Matrix brain
9 chr19:36362000-36373200 Weak transcription Fetal Brain Male brain
10 chr19:36362200-36370400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:36362400-36378200 Weak transcription H9 Cell Line embryonic stem cell
12 chr19:36362600-36378000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr19:36364800-36370800 Weak transcription Esophagus oesophagus
14 chr19:36366000-36378200 Weak transcription Gastric stomach
15 chr19:36367200-36371200 Genic enhancers Brain Hippocampus Middle brain
16 chr19:36367800-36378400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:36368600-36370600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr19:36369000-36370400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
19 chr19:36369600-36371000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr19:36369800-36370400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
21 chr19:36369800-36370400 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:36369800-36370600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr19:36369800-36370800 Enhancers H1 Cell Line embryonic stem cell
24 chr19:36369800-36371200 Enhancers Brain Substantia Nigra brain
25 chr19:36369800-36372800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr19:36370000-36370400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
27 chr19:36370000-36370800 Enhancers Brain Cingulate Gyrus brain
28 chr19:36370000-36371000 Enhancers Pancreas Pancrea
29 chr19:36370000-36371200 Enhancers K562 blood
30 chr19:36370000-36373200 Weak transcription Brain Angular Gyrus brain
31 chr19:36370200-36370400 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr19:36370200-36370400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr19:36370200-36370400 Bivalent Enhancer Muscle Satellite Cultured Cells --
34 chr19:36370200-36370400 Genic enhancers Brain Inferior Temporal Lobe brain
35 chr19:36370200-36370400 Bivalent Enhancer Placenta Placenta
36 chr19:36370200-36370600 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
37 chr19:36370200-36370600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:36370200-36370600 Weak transcription Brain Anterior Caudate brain
39 chr19:36370200-36370800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr19:36370200-36370800 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr19:36370200-36370800 Enhancers GM12878-XiMat blood
42 chr19:36370200-36371000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr19:36370200-36371000 Enhancers HSMMtube muscle
44 chr19:36370200-36371200 Enhancers HUES48 Cell Line embryonic stem cell
45 chr19:36370200-36371200 Enhancers A549 lung

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