Variant report

Variant	rs376240
Chromosome Location	chr19:36361090-36361091
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBL1XR1	chr19:36360756-36361172	K562	blood:	n/a	n/a
2	TCF12	chr19:36358456-36361435	A549	lung:	n/a	chr19:36359844-36359854 chr19:36359284-36359292
3	CREB1	chr19:36360076-36361110	A549	lung:	n/a	n/a
4	CHD2	chr19:36360337-36361225	H1-hESC	embryonic stem cell:	n/a	n/a
5	ELF1	chr19:36360470-36361326	A549	lung:	n/a	chr19:36361123-36361134
6	TBP	chr19:36360543-36361252	K562	blood:	n/a	n/a
7	JUND	chr19:36360782-36361297	H1-hESC	embryonic stem cell:	n/a	n/a
8	NR2F2	chr19:36360480-36361227	K562	blood:	n/a	n/a
9	MAX	chr19:36358923-36361482	A549	lung:	n/a	chr19:36360713-36360723 chr19:36360373-36360382 chr19:36360805-36360815
10	ZNF384	chr19:36360552-36361237	K562	blood:	n/a	n/a
11	BCL3	chr19:36359819-36361440	A549	lung:	n/a	chr19:36360912-36360921 chr19:36360553-36360562 chr19:36360410-36360418
12	MYC	chr19:36360507-36361304	K562	blood:	n/a	chr19:36360713-36360723 chr19:36360805-36360815
13	MAZ	chr19:36360080-36361302	K562	blood:	n/a	chr19:36360713-36360723 chr19:36360373-36360382 chr19:36360805-36360815
14	REST	chr19:36358766-36361303	H1-neurons	neurons:	n/a	chr19:36360778-36360788 chr19:36360770-36360790 chr19:36360770-36360790 chr19:36360776-36360790
15	MYC	chr19:36360511-36361322	K562	blood:	n/a	chr19:36360713-36360723 chr19:36360805-36360815
16	SIN3A	chr19:36359273-36361425	H1-hESC	embryonic stem cell:	n/a	chr19:36360298-36360311 chr19:36360775-36360789 chr19:36360472-36360481
17	SP4	chr19:36360484-36361408	H1-hESC	embryonic stem cell:	n/a	chr19:36360959-36360975 chr19:36361288-36361304 chr19:36360809-36360825 chr19:36361286-36361302 chr19:36360524-36360540 chr19:36360976-36360992 chr19:36361061-36361077 chr19:36360807-36360823 chr19:36361059-36361075
18	YY1	chr19:36359982-36361132	A549	lung:	n/a	chr19:36360298-36360309 chr19:36360847-36360858 chr19:36360396-36360405
19	MXI1	chr19:36360188-36361218	K562	blood:	n/a	chr19:36360367-36360382 chr19:36360325-36360340 chr19:36360369-36360384 chr19:36360417-36360432
20	IRF1	chr19:36360518-36361383	K562	blood:	n/a	chr19:36360731-36360745 chr19:36360978-36360992 chr19:36361290-36361304 chr19:36361131-36361145 chr19:36360911-36360920 chr19:36361063-36361077 chr19:36360811-36360825
21	ARID3A	chr19:36360868-36361320	K562	blood:	n/a	n/a
22	SP1	chr19:36359910-36361451	A549	lung:	n/a	chr19:36361063-36361075 chr19:36361291-36361301 chr19:36360812-36360822 chr19:36360812-36360822 chr19:36360221-36360235 chr19:36360461-36360473 chr19:36361026-36361040 chr19:36360224-36360236 chr19:36361064-36361074 chr19:36360800-36360814 chr19:36360728-36360742 chr19:36360313-36360325 chr19:36360713-36360722 chr19:36360461-36360473 chr19:36359960-36359974 chr19:36360818-36360839 chr19:36360310-36360324 chr19:36361183-36361192 chr19:36361063-36361075 chr19:36359927-36359941 chr19:36360811-36360823 chr19:36359959-36359973 chr19:36360733-36360742 chr19:36360313-36360325 chr19:36361182-36361194 chr19:36360713-36360723 chr19:36360314-36360323 chr19:36361297-36361318 chr19:36360811-36360823 chr19:36361037-36361058 chr19:36360462-36360471 chr19:36360731-36360743 chr19:36360458-36360472 chr19:36360714-36360723 chr19:36361290-36361302 chr19:36361291-36361301 chr19:36360962-36360972 chr19:36360962-36360972 chr19:36360731-36360743 chr19:36360314-36360324 chr19:36361064-36361074 chr19:36360713-36360723
23	TEAD4	chr19:36360836-36361391	K562	blood:	n/a	n/a
24	ZC3H11A	chr19:36360625-36361239	K562	blood:	n/a	n/a
25	JUND	chr19:36360621-36361342	K562	blood:	n/a	chr19:36361300-36361309
26	MAFF	chr19:36360825-36361231	K562	blood:	n/a	n/a
27	MAX	chr19:36359007-36361314	A549	lung:	n/a	chr19:36360713-36360723 chr19:36360373-36360382 chr19:36360805-36360815
28	ATF2	chr19:36360710-36361472	H1-hESC	embryonic stem cell:	n/a	n/a
29	SP1	chr19:36360157-36361415	H1-hESC	embryonic stem cell:	n/a	chr19:36361063-36361075 chr19:36361291-36361301 chr19:36360812-36360822 chr19:36360812-36360822 chr19:36360221-36360235 chr19:36360461-36360473 chr19:36361026-36361040 chr19:36360224-36360236 chr19:36361064-36361074 chr19:36360800-36360814 chr19:36360728-36360742 chr19:36360313-36360325 chr19:36360713-36360722 chr19:36360461-36360473 chr19:36360818-36360839 chr19:36360310-36360324 chr19:36361183-36361192 chr19:36361063-36361075 chr19:36360811-36360823 chr19:36360733-36360742 chr19:36360313-36360325 chr19:36361182-36361194 chr19:36360713-36360723 chr19:36360314-36360323 chr19:36361297-36361318 chr19:36360811-36360823 chr19:36361037-36361058 chr19:36360462-36360471 chr19:36360731-36360743 chr19:36360458-36360472 chr19:36360714-36360723 chr19:36361290-36361302 chr19:36361291-36361301 chr19:36360962-36360972 chr19:36360962-36360972 chr19:36360731-36360743 chr19:36360314-36360324 chr19:36361064-36361074 chr19:36360713-36360723
30	MAX	chr19:36360379-36361180	K562	blood:	n/a	chr19:36360713-36360723 chr19:36360805-36360815
31	MXI1	chr19:36358552-36361464	SK-N-SH	brain:	n/a	chr19:36360367-36360382 chr19:36360325-36360340 chr19:36360369-36360384 chr19:36360417-36360432
32	REST	chr19:36359474-36361275	A549	lung:	n/a	chr19:36360778-36360788 chr19:36360770-36360790 chr19:36360770-36360790 chr19:36360776-36360790
33	YY1	chr19:36360917-36361113	K562	blood:	n/a	n/a
34	SP1	chr19:36360117-36361476	H1-hESC	embryonic stem cell:	n/a	chr19:36361063-36361075 chr19:36361291-36361301 chr19:36360812-36360822 chr19:36360812-36360822 chr19:36360221-36360235 chr19:36360461-36360473 chr19:36361026-36361040 chr19:36360224-36360236 chr19:36361064-36361074 chr19:36360800-36360814 chr19:36360728-36360742 chr19:36360313-36360325 chr19:36360713-36360722 chr19:36360461-36360473 chr19:36360818-36360839 chr19:36360310-36360324 chr19:36361183-36361192 chr19:36361063-36361075 chr19:36360811-36360823 chr19:36360733-36360742 chr19:36360313-36360325 chr19:36361182-36361194 chr19:36360713-36360723 chr19:36360314-36360323 chr19:36361297-36361318 chr19:36360811-36360823 chr19:36361037-36361058 chr19:36360462-36360471 chr19:36360731-36360743 chr19:36360458-36360472 chr19:36360714-36360723 chr19:36361290-36361302 chr19:36361291-36361301 chr19:36360962-36360972 chr19:36360962-36360972 chr19:36360731-36360743 chr19:36360314-36360324 chr19:36361064-36361074 chr19:36360713-36360723
35	SP1	chr19:36359764-36361508	A549	lung:	n/a	chr19:36361063-36361075 chr19:36361291-36361301 chr19:36360812-36360822 chr19:36360812-36360822 chr19:36360221-36360235 chr19:36360461-36360473 chr19:36361026-36361040 chr19:36360224-36360236 chr19:36361064-36361074 chr19:36360800-36360814 chr19:36360728-36360742 chr19:36360313-36360325 chr19:36360713-36360722 chr19:36360461-36360473 chr19:36359960-36359974 chr19:36360818-36360839 chr19:36360310-36360324 chr19:36361183-36361192 chr19:36361063-36361075 chr19:36359927-36359941 chr19:36360811-36360823 chr19:36359959-36359973 chr19:36360733-36360742 chr19:36360313-36360325 chr19:36361182-36361194 chr19:36360713-36360723 chr19:36359866-36359880 chr19:36360314-36360323 chr19:36361297-36361318 chr19:36360811-36360823 chr19:36361037-36361058 chr19:36360462-36360471 chr19:36360731-36360743 chr19:36360458-36360472 chr19:36360714-36360723 chr19:36361290-36361302 chr19:36361291-36361301 chr19:36360962-36360972 chr19:36360962-36360972 chr19:36360731-36360743 chr19:36360314-36360324 chr19:36361064-36361074 chr19:36360713-36360723
36	ELF1	chr19:36360809-36361262	K562	blood:	n/a	chr19:36361123-36361134
37	EP300	chr19:36359898-36361377	A549	lung:	n/a	chr19:36360907-36360921 chr19:36360298-36360314
38	MXI1	chr19:36360098-36361094	IMR90	lung:	n/a	chr19:36360367-36360382 chr19:36360325-36360340 chr19:36360369-36360384 chr19:36360417-36360432
39	SP4	chr19:36360482-36361443	H1-hESC	embryonic stem cell:	n/a	chr19:36360959-36360975 chr19:36361288-36361304 chr19:36360809-36360825 chr19:36361286-36361302 chr19:36360524-36360540 chr19:36360976-36360992 chr19:36361061-36361077 chr19:36360807-36360823 chr19:36361059-36361075
40	REST	chr19:36360479-36361300	A549	lung:	n/a	chr19:36360778-36360788 chr19:36360770-36360790 chr19:36360770-36360790 chr19:36360776-36360790
41	MAX	chr19:36360098-36361482	H1-hESC	embryonic stem cell:	n/a	chr19:36360713-36360723 chr19:36360373-36360382 chr19:36360805-36360815
42	MAX	chr19:36360354-36361204	MCF-7	breast:	n/a	chr19:36360713-36360723 chr19:36360373-36360382 chr19:36360805-36360815
43	RCOR1	chr19:36360281-36361366	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:36358705..36361314-chr19:36484649..36486725,2	K562	blood:
2	chr19:36235922..36238148-chr19:36359346..36361404,2	MCF-7	breast:
3	chr19:36359272..36362126-chr19:36389056..36392231,3	MCF-7	breast:
4	chr19:36359233..36364587-chr19:36367940..36372688,7	K562	blood:
5	chr19:36335780..36337313-chr19:36359455..36361667,2	MCF-7	breast:
6	chr19:36208378..36210285-chr19:36358548..36361708,3	K562	blood:
7	chr19:36335744..36339702-chr19:36359166..36361673,6	MCF-7	breast:
8	chr19:36338551..36341228-chr19:36359496..36361624,3	K562	blood:
9	chr19:36208544..36210188-chr19:36360524..36362280,2	MCF-7	breast:
10	chr19:36359256..36363302-chr19:36368429..36371554,3	K562	blood:
11	chr19:36208185..36209878-chr19:36358146..36361161,3	K562	blood:
12	chr19:36359598..36361922-chr19:36393124..36395167,2	K562	blood:

Variant related genes	Relation type
NPHS1	TF binding region
APLP1	TF binding region
ENSG00000272333	Chromatin interaction
ENSG00000267120	Chromatin interaction
ENSG00000105290	Chromatin interaction
ENSG00000205138	Chromatin interaction
ENSG00000161270	Chromatin interaction
ENSG00000161265	Chromatin interaction
ENSG00000126264	Chromatin interaction
ENSG00000188223	Chromatin interaction
ENSG00000167604	Chromatin interaction
ENSG00000205155	Chromatin interaction

Extended variants
information (count: 101 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs11084834	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs11878547	0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs11880909	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs11881358	1.00[EUR][1000 genomes]
rs11881364	1.00[EUR][1000 genomes]
rs11881451	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16960862	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs16970735	1.00[EUR][1000 genomes]
rs16970737	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16970742	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16970744	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs172985	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs1802029	0.86[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2227909	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs230260	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs230261	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs230262	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs230263	1.00[EUR][1000 genomes]
rs230264	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs230265	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs230266	1.00[EUR][1000 genomes]
rs230267	1.00[EUR][1000 genomes]
rs230268	0.91[EUR][1000 genomes]
rs230269	1.00[EUR][1000 genomes]
rs2871778	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs33964243	0.83[ASN][1000 genomes]
rs34006827	1.00[EUR][1000 genomes]
rs35423326	1.00[EUR][1000 genomes]
rs392702	0.85[TSI][hapmap];0.86[EUR][1000 genomes]
rs393116	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs401824	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs404299	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs412175	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs417786	0.86[EUR][1000 genomes]
rs437168	1.00[CEU][hapmap];0.85[TSI][hapmap];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs443186	1.00[CEU][hapmap];0.83[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs447783	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55797913	1.00[EUR][1000 genomes]
rs55816190	1.00[EUR][1000 genomes]
rs56264349	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57053076	1.00[EUR][1000 genomes]
rs57668132	1.00[EUR][1000 genomes]
rs58098901	1.00[EUR][1000 genomes]
rs58109577	1.00[EUR][1000 genomes]
rs58291714	0.95[EUR][1000 genomes]
rs58422001	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs58504183	0.81[EUR][1000 genomes]
rs58551711	0.81[EUR][1000 genomes]
rs59123406	1.00[EUR][1000 genomes]
rs59658571	1.00[EUR][1000 genomes]
rs60268250	0.95[EUR][1000 genomes]
rs60576074	0.95[EUR][1000 genomes]
rs60869994	0.95[EUR][1000 genomes]
rs60935148	0.81[EUR][1000 genomes]
rs61623584	1.00[EUR][1000 genomes]
rs619833	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7251744	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7251879	1.00[ASW][hapmap];0.80[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];1.00[YRI][hapmap];0.91[ASN][1000 genomes]
rs7252902	0.81[ASN][1000 genomes]
rs7253040	0.83[ASN][1000 genomes]
rs7253086	0.81[EUR][1000 genomes]
rs7253826	0.83[ASN][1000 genomes]
rs7254113	0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7256433	0.81[EUR][1000 genomes]
rs7257789	0.82[ASW][hapmap];0.83[YRI][hapmap]
rs7258154	0.83[ASN][1000 genomes]
rs7258214	0.90[ASN][1000 genomes]
rs7258909	1.00[ASW][hapmap];1.00[CEU][hapmap];0.80[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73590883	0.85[EUR][1000 genomes]
rs73594463	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73599600	0.81[EUR][1000 genomes]
rs73928331	0.90[EUR][1000 genomes]
rs73928332	1.00[EUR][1000 genomes]
rs73928333	1.00[EUR][1000 genomes]
rs807660	1.00[EUR][1000 genomes]
rs8105153	0.83[ASN][1000 genomes]
rs8106480	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs8106495	0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs8106732	1.00[EUR][1000 genomes]
rs8108360	0.83[ASN][1000 genomes]
rs8108459	0.83[ASN][1000 genomes]
rs8110231	0.87[CHD][hapmap];1.00[JPT][hapmap]
rs8110926	1.00[EUR][1000 genomes]
rs8111209	1.00[EUR][1000 genomes]
rs8111348	1.00[EUR][1000 genomes]
rs8111740	0.83[ASN][1000 genomes]
rs8113524	0.87[CHD][hapmap];1.00[JPT][hapmap]
rs8113704	1.00[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[YRI][hapmap];0.88[ASN][1000 genomes]
rs879407	1.00[ASW][hapmap];1.00[CEU][hapmap];0.80[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9749325	1.00[EUR][1000 genomes]
rs9749492	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432045	chr19:35556260-36520760	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
2	nsv911638	chr19:36265508-36537959	Enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	esv3526489	chr19:36306483-36741945	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
4	esv3526490	chr19:36306483-36741945	Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
5	esv1831737	chr19:36324324-36690874	Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
6	esv3397651	chr19:36326933-36377725	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
7	nsv833812	chr19:36331913-36507594	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
8	nsv833813	chr19:36341181-36499431	Flanking Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
9	nsv911639	chr19:36342909-36365985	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
10	nsv911640	chr19:36353880-36365985	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36358800-36361400	Active TSS	H9 Cell Line	embryonic stem cell
2	chr19:36358800-36361400	Bivalent Enhancer	Placenta	Placenta
3	chr19:36359000-36361200	Enhancers	Fetal Lung	lung
4	chr19:36359200-36361200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr19:36359200-36361200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:36359200-36361400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr19:36359200-36361400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
8	chr19:36359200-36361400	Enhancers	Liver	Liver
9	chr19:36359200-36361400	Enhancers	Fetal Heart	heart
10	chr19:36359200-36361800	Active TSS	Fetal Brain Female	brain
11	chr19:36359200-36362000	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr19:36359400-36361400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr19:36359400-36361800	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr19:36359600-36361200	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
15	chr19:36359600-36361200	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr19:36359600-36361400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
17	chr19:36359600-36361400	Bivalent Enhancer	Primary B cells from cord blood	blood
18	chr19:36359600-36361400	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
19	chr19:36359600-36361400	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
20	chr19:36359800-36361200	Enhancers	Left Ventricle	heart
21	chr19:36359800-36361200	Enhancers	Lung	lung
22	chr19:36359800-36361400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr19:36359800-36361400	Bivalent Enhancer	Fetal Thymus	thymus
24	chr19:36359800-36361400	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
25	chr19:36359800-36361400	Bivalent Enhancer	Small Intestine	intestine
26	chr19:36359800-36370200	Weak transcription	HSMMtube	muscle
27	chr19:36360000-36361200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr19:36360000-36361200	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
29	chr19:36360000-36361200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
30	chr19:36360000-36361200	Enhancers	Ovary	ovary
31	chr19:36360000-36361200	Flanking Bivalent TSS/Enh	Rectal Smooth Muscle	rectum
32	chr19:36360000-36361200	Flanking Active TSS	Right Ventricle	heart
33	chr19:36360000-36361200	Enhancers	HMEC	breast
34	chr19:36360000-36361400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
35	chr19:36360000-36361400	Bivalent Enhancer	Spleen	Spleen
36	chr19:36360200-36361200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
37	chr19:36360200-36361200	Enhancers	Primary hematopoietic stem cells	blood
38	chr19:36360200-36361200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
39	chr19:36360200-36361200	Enhancers	Gastric	stomach
40	chr19:36360200-36361200	Bivalent Enhancer	Stomach Mucosa	stomach
41	chr19:36360200-36361400	Active TSS	HUES64 Cell Line	embryonic stem cell
42	chr19:36360200-36361400	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr19:36360200-36361400	Enhancers	HUVEC	blood vessel
44	chr19:36360200-36361600	Active TSS	iPS-20b Cell Line	embryonic stem cell
45	chr19:36360200-36362000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
46	chr19:36360200-36379000	Weak transcription	Aorta	Aorta
47	chr19:36360400-36361200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr19:36360400-36361200	Enhancers	Osteobl	bone
49	chr19:36360400-36361400	Active TSS	Brain Angular Gyrus	brain
50	chr19:36360400-36361600	Active TSS	HUES6 Cell Line	embryonic stem cell

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