The 2.0 version of rSNPBase

Variant report

Variant rs28718838
Chromosome Location chr4:174081080-174081081
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174055000-174086000 Weak transcription Thymus Thymus
2 chr4:174065200-174087200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:174065400-174083600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr4:174066800-174089000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:174066800-174089000 Weak transcription HSMM muscle
6 chr4:174069200-174088800 Weak transcription HMEC breast
7 chr4:174072200-174089000 Weak transcription Fetal Stomach stomach
8 chr4:174073000-174085400 Weak transcription Fetal Muscle Leg muscle
9 chr4:174073600-174089000 Weak transcription Pancreas Pancrea
10 chr4:174073600-174089200 Weak transcription Aorta Aorta
11 chr4:174073800-174089000 Weak transcription NHLF lung
12 chr4:174074200-174083600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr4:174074600-174088800 Weak transcription Fetal Intestine Small intestine
14 chr4:174075400-174088600 Weak transcription Fetal Intestine Large intestine
15 chr4:174075800-174088800 Weak transcription Primary monocytes fromperipheralblood blood
16 chr4:174076400-174088400 Weak transcription Primary T cells from cord blood blood
17 chr4:174076800-174086000 Weak transcription HUVEC blood vessel
18 chr4:174077200-174085600 Weak transcription GM12878-XiMat blood
19 chr4:174077200-174088800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr4:174077600-174083600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr4:174077600-174085600 Weak transcription Fetal Muscle Trunk muscle
22 chr4:174077800-174089000 Weak transcription Primary B cells from peripheral blood blood
23 chr4:174078200-174084400 Weak transcription Primary hematopoietic stem cells blood
24 chr4:174078400-174088800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:174079600-174087000 Weak transcription Dnd41 blood
26 chr4:174079600-174087800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr4:174079600-174088800 Weak transcription Rectal Smooth Muscle rectum
28 chr4:174080000-174084400 Weak transcription Fetal Thymus thymus
29 chr4:174080000-174089000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr4:174080800-174081200 Enhancers HUES48 Cell Line embryonic stem cell
31 chr4:174080800-174081200 Enhancers HUES64 Cell Line embryonic stem cell
32 chr4:174080800-174081200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr4:174080800-174081200 Enhancers iPS-20b Cell Line embryonic stem cell
34 chr4:174080800-174081400 Strong transcription Primary B cells from cord blood blood
35 chr4:174080800-174081400 Enhancers Fetal Heart heart
36 chr4:174080800-174081800 Enhancers HSMMtube muscle
37 chr4:174080800-174082800 Enhancers K562 blood
38 chr4:174081000-174081200 Enhancers HUES6 Cell Line embryonic stem cell
39 chr4:174081000-174081400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr4:174081000-174082000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr4:174081000-174087200 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr4:174081000-174088200 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr4:174081000-174088400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr4:174081000-174088800 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr4:174081000-174089000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015