Variant report

Variant	rs2876922
Chromosome Location	chr5:41496069-41496070
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10057833	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10060029	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10063143	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10063880	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10075789	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10941543	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11951028	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1598738	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1827692	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2219354	0.86[ASN][1000 genomes]
rs2644046	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs318018	1.00[ASN][1000 genomes]
rs3863150	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs566188	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602985	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs603855	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs624733	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs628092	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6451576	0.87[EUR][1000 genomes]
rs655419	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs661518	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs662066	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs664232	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs675451	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs676328	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs685542	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6871147	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6877159	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs688551	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6895255	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7700933	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7714031	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs822138	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs822139	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs822141	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs822146	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs861980	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9292809	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3386611	chr5:41494995-41498593	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41486200-41497200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:41494400-41504600	Weak transcription	Ovary	ovary
3	chr5:41495800-41507000	Weak transcription	Left Ventricle	heart
4	chr5:41496000-41497800	Weak transcription	Fetal Heart	heart

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