Variant report

Variant	rs28780087
Chromosome Location	chr6:30109773-30109774
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs28780084	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28780085	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28780088	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28780089	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28780090	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28780092	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28780096	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30105400-30111600	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr6:30105400-30111800	Weak transcription	Duodenum Mucosa	Duodenum
3	chr6:30107000-30111800	Weak transcription	Fetal Intestine Large	intestine
4	chr6:30107600-30111400	Weak transcription	HepG2	liver
5	chr6:30109200-30111800	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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