The 2.0 version of rSNPBase

Variant report

Variant rs28829343
Chromosome Location chr1:93732527-93732528
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:93725200-93732600 Weak transcription NHDF-Ad bronchial
6 chr1:93727800-93741600 Weak transcription Fetal Kidney kidney
7 chr1:93728600-93738400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:93728600-93741000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:93728600-93741400 Weak transcription Duodenum Mucosa Duodenum
10 chr1:93728600-93751400 Weak transcription Adipose Nuclei Adipose
11 chr1:93728600-93754800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
13 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
14 chr1:93728600-93770400 Weak transcription HSMM muscle
15 chr1:93728800-93732600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr1:93728800-93732800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:93728800-93736000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:93728800-93740200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:93728800-93740400 Weak transcription Liver Liver
20 chr1:93728800-93740400 Weak transcription Fetal Intestine Large intestine
21 chr1:93728800-93746600 Weak transcription Aorta Aorta
22 chr1:93728800-93751600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:93728800-93751800 Weak transcription Placenta Placenta
24 chr1:93728800-93752600 Weak transcription Brain Hippocampus Middle brain
25 chr1:93728800-93752600 Weak transcription Fetal Stomach stomach
26 chr1:93728800-93753800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:93728800-93754800 Weak transcription Ovary ovary
28 chr1:93728800-93755000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:93728800-93755000 Weak transcription Left Ventricle heart
30 chr1:93728800-93755000 Weak transcription Stomach Smooth Muscle stomach
31 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:93729000-93739000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:93729000-93745600 Weak transcription Fetal Muscle Trunk muscle
34 chr1:93729000-93790200 Weak transcription Osteobl bone
35 chr1:93729600-93741800 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:93729800-93732600 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:93729800-93740200 Weak transcription Fetal Intestine Small intestine
38 chr1:93729800-93745400 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:93729800-93752600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:93729800-93754800 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr1:93729800-93763200 Weak transcription Pancreas Pancrea
42 chr1:93730000-93734200 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr1:93730000-93741200 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr1:93730000-93745400 Weak transcription Thymus Thymus
45 chr1:93730000-93745600 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:93730000-93754400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:93730400-93739800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:93730400-93745600 Weak transcription Fetal Lung lung
49 chr1:93730400-93745800 Weak transcription Primary T cells fromperipheralblood blood
50 chr1:93730400-93748200 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015